FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1096.ptfa, 2062 aa vs ./tmplib.26680 library 1766955 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 15.4656+/-0.0118; mu= -27.2197+/- 0.784 mean_var=793.5144+/-192.054, 0's: 0 Z-trim: 7 B-trim: 0 in 0/36 Lambda= 0.0455 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 42, opt: 30, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4178 ( 1796 res) mtg01289 (1796) 1464 113 7.8e-25 mKIAA0515 ( 915 res) mbg05347 ( 915) 533 52 1.2e-06 >>mKIAA4178 ( 1796 res) mtg01289 (1796 aa) initn: 1526 init1: 497 opt: 1464 Z-score: 538.2 bits: 113.0 E(): 7.8e-25 Smith-Waterman score: 2621; 33.953% identity (42.315% ungapped) in 1938 aa overlap (10-1802:1-1700) 10 20 30 40 50 60 mKIAA1 VSTEMSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRM : ..:.::::::..:.::.:::::::: :: .:: ::::::::::.:.::: mKIAA4 GPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRM 10 20 30 40 50 70 80 90 100 mKIAA1 PPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEE-------KAPEVSP------ ::::::::::::::::::::..:::::::::::::: . . . :: .: mKIAA4 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQT 60 70 80 90 100 110 110 120 130 140 150 mKIAA1 ---AQPKPGVAAP---PEVAPAPKSW--ASNKQGGQGDGIQVN---SQF-QQEFPSLQAA ::: .:: : : . ::: :: .:..::: ... :.: ..:::.:::: mKIAA4 PASNQPKRPPTAPENTPSVPSGVKSWAQASVTHGAHGDGGRASNLLSRFSREEFPTLQAA 120 130 140 150 160 170 160 170 180 190 200 210 mKIAA1 GDQEK--KEKEANDENYGPGPSLRPPNVACWRDGGKCAGSPSSDQDEKQLGQDESTAITS :::.: ::.:. ... :::::::: : . ::::: : .: . : : . mKIAA4 GDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGG---GRGPDDLE----GPDSKLHHGH 180 190 200 210 220 220 230 240 250 260 270 mKIAA1 EQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGP---M . :. :::: : ::.::::.:. : . .:: .:: . mKIAA4 DPRGGLQ------PSGPPQFP-----P-----YRGMMPPFMYP--PYLPFPPPYGPQGPY 230 240 250 260 280 290 300 310 320 mKIAA1 RFP----PSLSEANKSLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAG :.: :: . :: ::: . :::::. ..::: ::.:: : :.:::: mKIAA4 RYPTPDGPSRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKE---FDQLDQENDDGWAG 270 280 290 300 310 320 330 340 350 360 370 380 mKIAA1 AQMEVDYTEQLNFSDDDEQGSTSPKESSSEDQTAKTPESTENRKEVDEASSTKSSSQIPA :. ::::::.:.:::. :.: : .:.. . ... . : :.: ..:. .:..: mKIAA4 AHEEVDYTEKLKFSDE-EDGRDSDEEGAEGHKDSQSAAAEE--PETDGKKGTSPGSELP- 330 340 350 360 370 390 400 410 420 430 440 mKIAA1 QPPVTKSPYGKGPPFNQERGPSSHLPPPP--KLLAQQHPPPPDRQIPGRQGPFPSKPPVP :: : . : .. :. . :::: . . . :: : : : :: : :::.: mKIAA4 -PPKTAWTENARPSETEPAPPTPKPPPPPPHRGPVGNWGPPGDY--PDRGGP-PCKPPAP 380 390 400 410 420 430 450 460 470 480 490 500 mKIAA1 -DNDEIWKQRRKQQS-EISAAVERARKRREEEERRMEEQRKAACAEKLKQLDEKLGIIEK :.:: :.:::::.: ::: ::::::.:::::::::.:.:.::::::::.::::.: .: mKIAA4 EDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKRLDEKFGAPDK 440 450 460 470 480 490 510 520 530 540 550 mKIAA1 ----QPS--PEELREREREKERERELEKEKERELEKEQEKQREMERARQQEKELEQQREK .:. : .:. ..: :. : mKIAA4 RLKAEPAAPPVTPAAPALPPVVPKEIPAAPALPPTPTPTPEKEPEEPAQAPPVQAAPSPG 500 510 520 530 540 550 560 570 580 590 600 610 mKIAA1 EQELQRLREQEKEGEPKEQEKEEKVEPQEPVVEPATENQESENNCKKEEEPIFTRQDSNR . : ... .. : :: . :. :. : :: : : . . mKIAA4 VAPVPTLVSGGGCTANSNSSGSFEASPVEPQL-PSKEGPEPP-----EEVPPPTTPPAPK 560 570 580 590 600 620 630 640 650 660 670 mKIAA1 SEKETTQVVQEAEPESGAQPRPGYFKQFQKSLPPRFQRQQEQ--MKQQQWQQQQQQQQQG : . : . .: : . : : ::::::::::::.. .:::: ::: :::::: mKIAA4 MEPKGDGVGSTRQPPSQGLGYPKY----QKSLPPRFQRQQQEQLLKQQQQQQQWQQQQQG 610 620 630 640 650 660 680 690 700 710 720 mKIAA1 VLPQT-VPSQPSN----GSV-----PPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYM . : . :: .: . :.: :::: . :: .: . :.:::::.:. :. mKIAA4 TAPPAPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYV 670 680 690 700 710 720 730 740 750 760 770 780 mKIAA1 DPRMISGRPAMDIPPIHPGMIPPKPLIRRDQMEGSPNSSESFE-HIARSARDHGISLSEP :::...::: .:. : :: . :. :. :.. ... .::: :: : :..: .: mKIAA4 DPRLLQGRPPLDFYP--PG-VHPSGLVPRERSDSGGSSSEPFERHAPPLLRERGTPPVDP 730 740 750 760 770 780 790 800 810 820 830 840 mKIAA1 RMMWGSDPYHAEPQQAATPKSAEETGDARPETAMDHEHMTAAYPVEHSQLETHSKTDVAR .. : .: . . : : :: :. :... : mKIAA4 KLAWVGDVFTTTPT------------DPRPLTS----------PLRQ-----------AA 790 800 850 860 870 880 890 900 mKIAA1 DSTETEGQKFLSRSLEDVKPRHVDTNTQSACFDVIDQKSLPTSAEERISALESQPARKRS : : .:... : : . . ... : :. :: : : mKIAA4 DEEE--------KSMRSETPPVPPPPPYLANYPGFPENGTPGPPISRFPLEESAPPGPRP 810 820 830 840 850 860 910 920 930 940 950 960 mKIAA1 VSHGSNHAQNAEEQRNEPSVSIPKVINRCMDSKETVEKPEEKPRKDGFLRSSEGPKPEKV . .. . :. : :. : ... :. .:: :...:: : . mKIAA4 LPWPPGNDEAAKMQAPPPKKEPSKEEPPQLSGPEAGRKPA---------RGGQGPPPPR- 870 880 890 900 910 970 980 990 1000 1010 1020 mKIAA1 YKSKSETRWGPRPSSNRR---EEGNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGEKLEK ....::::::::.: :: : : ::.:::::: mKIAA4 RENRTETRWGPRPGSCRRGIPPEEPGVPPRRAGPIKKP---------------------- 920 930 940 1030 1040 1050 1060 1070 1080 mKIAA1 VTEKVVKAEKPEKKDLPLPLPPPAPAQPQPQPLVSPPVQPEPEKPPSTETSTLTQKPSQD ::.:. ::: . : . : : :.:. .: : . mKIAA4 --PPPVKVEE---------LPPKSLEQGDETPKV-----PKPDA-----LKTAKGKVGPK 950 960 970 980 1090 1100 1110 1120 1130 1140 mKIAA1 EKPLEPVGSVQVEPVVKTVNQQSVAAPTVKEEKPPEKVINKDVGIERSRPDSRLAVKKDS : : : :... : :: .. .: . :: : : mKIAA4 ETP--PGGNLS--P-----------APRLR----------RDYSYERVGPTS-------- 990 1000 1010 1150 1160 1170 1180 1190 mKIAA1 SLPTRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHT-REYPQYR ::::::::..:::..::.:::::::.:.. : : ..: mKIAA4 ---------------------CRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFR 1020 1030 1040 1050 1200 1210 1220 1230 1240 1250 mKIAA1 DNKPR------TEHVPSGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESAS . : :.: ::.: : : ::::::.:..: .::::::::::: ::.::: mKIAA4 GDDGRGGGSGGTNH-PSAP-RGRTASETRSEGSEYEEIPKRRRQRGSETG--SETHES-- 1060 1070 1080 1090 1100 1260 1270 1280 1290 1300 1310 mKIAA1 DKDSVSKGKLPKREERPENKKPVKPQSSFKPENHVRIDNRPLEKPYIREEDKSKPGFLPK : . :. .: : :. : : . : . : : .. : :. mKIAA4 --DLA-----PSDKEAPPPKEGVLGQVPLAPPQP---GAPPSPAPARFSTARGGRVFTPR 1110 1120 1130 1140 1150 1320 1330 1340 1350 1360 1370 mKIAA1 GEPTRRGRGGTFRRGGRDPGGRPSRPATLRRPAYRDNQWN--TRQAEPPKPEDGG-PPRR : :.:::::: :: : :. . :. ... : :: : :: . mKIAA4 GVPSRRGRGG-----GRPP------PVC--------SGWSPPAKSLVPKKPPTGPLPPSK 1160 1170 1180 1190 1380 1390 1400 1410 1420 mKIAA1 H---EQFM--PIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLR-EREAAS . :... :. .: .. .. . :::::.: : .::::::::::. ::: :. mKIAA4 EPLKEKLISGPLSPMSRAGNMGVGMEDG-ERPRRRRHGRAQQQDKPPRFRRLKQERENAA 1200 1210 1220 1230 1240 1250 1430 1440 1450 1460 1470 mKIAA1 KTSEVLVPS-------NGTANNVVQEPVNPPADISGNKTPDLSNQNSSDQANEEWETASE . .. :: : .... : :: .. :.:::::::: :::::::::::: mKIAA4 RGADGKPPSLTLAASTPGPEETLTAATVPPPPRRTAAKSPDLSNQNS-DQANEEWETASE 1260 1270 1280 1290 1300 1310 1480 1490 1500 1510 1520 mKIAA1 SSDF-NERR-ERDEKKNADMSSQAVVK-------AGESVLPPKR--------EIAKRSFS :::: .::: ... : :.:.:: :: .. .: ...::::: mKIAA4 SSDFASERRGDKETPPAALMTSKAVGTPGANAGGAGPGISAMSRGDLSQRAKDLSKRSFS 1320 1330 1340 1350 1360 1370 1530 1540 1550 1560 mKIAA1 SQRPGVDRQNRR-GNNGPPKSGRNFSG-----P-------RNERRNGPPSKGGKRGPFDD :::::.:::::: :..: :: . :: : :...:. : :. .: : .. mKIAA4 SQRPGMDRQNRRPGTGGKTGSGGGSSGGGGAGPGGRTGPGRGDKRSWPSPKNRSRPP-EE 1380 1390 1400 1410 1420 1430 1570 1580 1590 1600 1610 mKIAA1 QASGTAGADPVSGNSA--------H-HQEGVPNGAGQKNSKDA-----AGKKREDTKPGP . : : ..:: : . :. .. .: .:... .:. : :::: mKIAA4 RPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGNVTAPGGHPRP--KPGP 1440 1450 1460 1470 1480 1490 1620 1630 1640 1650 1660 mKIAA1 KKPKEKVDAL--SQFDLNNYASVVIIDDHPEVT--VIEDPQSNLNDDGFTEVVSKKQQKR . . . ...: .:.. : : : ... .. :.. .. :...: mKIAA4 PQAPQGSSPRPPTRYDPPRASSAISSDPHFEEPGPMVRGVGGTPRDSAGVNPFPPKRRER 1500 1510 1520 1530 1540 1550 1670 1680 1690 1700 1710 mKIAA1 LQDEERRKKEEQVVQVWSKKNIG---------EKGR-SQTSKLPPRFAKKQATGTQQIQA . . .:: : :. .: :..: : : : :.. .. :.:.. . mKIAA4 PPRKPELLQEETVPASHSSGFLGSKPEVPGPQEESRDSGTEALTPHIWNRLHTATSRKSY 1560 1570 1580 1590 1600 1610 1720 1730 1740 1750 1760 1770 mKIAA1 PPSAPVPVSSSAPGLTAPAAAAPASTPAPVPILA-SATALVPVS---TPAPVLTSCPAPV :.. : . :.. ... . : . . : .. : : .: : . mKIAA4 QPGSIEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGSAEGP 1620 1630 1640 1650 1660 1670 1780 1790 1800 1810 1820 1830 mKIAA1 PTSASAPVPASTSSPVTASSSSQPSVPAPTPVLASASTTVSVPILTSASIPILASALAPA : ..: : . . : ..:.:.:: : mKIAA4 PKRPGGPSPLN-AVPGESASGSEPSEPPRRRPPASHEGERKELPREQPLPPGPIGTERSQ 1680 1690 1700 1710 1720 1730 >>mKIAA0515 ( 915 res) mbg05347 (915 aa) initn: 501 init1: 275 opt: 533 Z-score: 211.4 bits: 51.6 E(): 1.2e-06 Smith-Waterman score: 620; 29.619% identity (33.611% ungapped) in 682 aa overlap (1407-2042:1-647) 1380 1390 1400 1410 1420 1430 mKIAA1 IPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLR-EREAASKTSEVLVPSNG :. ::::::::: :::. . . : . mKIAA0 RHAKPPRFRRLRQERESLG----LWGPEEE 10 20 1440 1450 1460 1470 1480 mKIAA1 TANNVVQEPVNP---PADISG---NKTPDLSNQNSSDQANEEWETASESSDFNERRERDE . . : : :.: :: ...:.:: :::::.::::::::::::::.::::: : mKIAA0 SHLLASQWPGRSKLCPGDKSGPGGHRSPELSYQNSSDHANEEWETASESSDFSERRERRE 30 40 50 60 70 80 1490 1500 1510 1520 1530 1540 mKIAA1 KKNADMSSQAVVKAGESVLPPKREIAKRSFSSQRPGVDRQNRRGNNG-----PPKSGRNF :. .:. . : : :.:.:::::::::: .:::.:. . : : . : . mKIAA0 GLVAEPEAQGDGGLSGSSLGEKKELAKRSFSSQRPLADRQSRKLEPGGFGEKPVRPGGGE 90 100 110 120 130 140 1550 1560 1570 1580 1590 1600 mKIAA1 SGPRNE-RRNGPPSKGGKRGPFDDQASGTAGADPVSGN-SAHHQEGVPNGAGQKNSKDAA .:: : ...: : : ::.: . .: .. .: . . ..: . :. ..:. mKIAA0 PSPRCESQQSGTPLKV-KRSPDEALPGGLGSHSPYALERTTHASSDGPETPSKKS----- 150 160 170 180 190 200 1610 1620 1630 1640 1650 1660 mKIAA1 GKKREDTKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVIEDPQSNLNDDGFTEVV .:: . : .. .:. .: .::::. :... .::. :. :.. .:: ::. mKIAA0 --EREVSLP-TQRASEQEEARKQFDLG-YGNA-LIDNCASSPGEENEASSVVGEGFIEVL 210 220 230 240 250 1670 1680 1690 1700 1710 mKIAA1 SKKQQKRLQDEERRKKEEQVVQVWSKKNIGEKGRSQTSKLPPRFAKKQATGT---QQIQA .::: .:: .::::::: :..:: :::. .:..:::::::: .: :.. . mKIAA0 TKKQ-RRLLEEERRKKE-QAAQV------PVKGRGLSSRIPPRFAKKQ-NGLCLEQDVTV 260 270 280 290 300 1720 1730 1740 1750 1760 1770 mKIAA1 PPSA-PVPV-SSSAPGLTAPAAAAPASTPAPVPILASATALVPVSTPAPVLTSCPAPVPT : :. . . .:. .: . .::. . : : ..:. : .. . .. . : mKIAA0 PGSSLGTEIWENSSQALPVQGAASDSWRTA-VTAFSSTE---PGTSEGFKSSQGDSGVDL 310 320 330 340 350 360 1780 1790 1800 1810 1820 1830 mKIAA1 SASAPVPASTSSPVTASSSSQPSVPAPTPVLA-SASTTVSVPILTSASIPILASALAPAT :: . ..::: .. .. : :: : . . . .: .. : . mKIAA0 SAESRESSATSSQRSSPYGTLKPEEISGPGLAESKADSHKDQAQKQAEHKDSEQGSAQSK 370 380 390 400 410 420 1840 1850 1860 1870 1880 mKIAA1 VSSPTPVVSATAVPSISTPAVPASAPTASVPLAPASAA-----STVPPPGLD-SADP-DP : :. . .. . . : : :: :.... :..: : .. ...: : mKIAA0 EHRPGPIGNERSLKNRKGSEGAERLPGAVVP--PVNGVEIHVDSVLPVPPIEFGVSPKDS 430 440 450 460 470 480 1890 1900 1910 1920 1930 1940 mKIAA1 DPQTSPESTRLPSAQ-TSNGTDFVA--AG--KSMPTSQSHGSLTAELWDSKVAAPAVLND : . : :. : .. ... : .: :: .:.: . . . : .. :.. : mKIAA0 DFSLPPGSVSGPVGNPVAKLQDVLASNAGLTQSIPILRRDHHMQRAIGLSPMSFPTA--D 490 500 510 520 530 1950 1960 1970 1980 1990 mKIAA1 ISKKL---------GPISPPQ--PPSVSAWNKPLTSFGSATSSEGTRNGQESGVEIGIDT .. :. .: : : : .... .: .: :. :.:. .. .:: . mKIAA0 LTLKMESARKAWENSPSLPEQSSPGGAGSGIQPPSSVGA---SNGVNYSSFGGVSMPPMP 540 550 560 570 580 590 2000 2010 2020 2030 2040 2050 mKIAA1 IQFGAPASNGNENEVVPV-LSEKATDKVPE--PKEQRQKQPRAGPIKAQKLPDLSLVENK . ::... ... :. :. .. . :. :. :.: ::..: mKIAA0 VASVAPSASIPGSHLPPLYLDGHVFASQPRLVPQTIPQQQSYQQAATAQQIPISLHTSLQ 600 610 620 630 640 650 2060 mKIAA1 EHKPGPIGKERS mKIAA0 AQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLSPPSTMILSGGTALKPPYSAFPGI 660 670 680 690 700 710 2062 residues in 1 query sequences 1766955 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:36:00 2006 done: Mon Mar 27 10:36:02 2006 Scan time: 1.470 Display time: 0.440 Function used was FASTA [version 3.4t11 Apr 17, 2002]