FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1091.ptfa, 1217 aa vs ./tmplib.26680 library 1767800 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.3793+/-0.00462; mu= 15.6905+/- 0.310 mean_var=104.1052+/-24.161, 0's: 0 Z-trim: 9 B-trim: 0 in 0/36 Lambda= 0.1257 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1766 ( 618 res) mfj69272 ( 618) 327 71 9.5e-13 mKIAA3020 ( 1884 res) mbg15810 (1884) 307 67 2.5e-11 mKIAA1608 ( 845 res) mkg10115 ( 845) 294 65 7.4e-11 mKIAA0870 ( 1280 res) mth00251 (1280) 288 64 2.1e-10 mKIAA1277 ( 1074 res) mph01932 (1074) 282 63 4e-10 mKIAA0358 ( 1581 res) mbg05815 (1581) 272 61 1.8e-09 mKIAA0871 ( 471 res) mbh00987 ( 471) 147 38 0.0053 >>mKIAA1766 ( 618 res) mfj69272 (618 aa) initn: 273 init1: 273 opt: 327 Z-score: 321.2 bits: 70.5 E(): 9.5e-13 Smith-Waterman score: 386; 27.976% identity (33.216% ungapped) in 336 aa overlap (6-335:66-354) 10 20 30 mKIAA1 RTFKSKVLARYPENVDWN--PFDQDAVGMLCMPKG :.. :.:.. ::. :: : .. ..:.: : mKIAA1 AAAAVMARLADYFIVVGYDHEKPGPGEGLGKIIQRFPQQ-DWDDTPFPQ-GIELFCQPGG 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA1 LAFKTQADPREPQFHAFIITREDGSRTFGFALTFYEEVTSKQICSAMQTLYHMHNAEYDV .. . . ..: : . ..: :..: . ::::: :: .. mKIAA1 --WHLSRERKQPTFFVVVLTDIDSDRHYCSCLTFYE-------------------AEINL 100 110 120 130 100 110 120 130 140 150 mKIAA1 LHAPLADGGDQSGMEDGEGIPGTKLQRFNSYDISRDTLYVSKCICLITPMSFMKACRSVL .: . .: :: . : :. ... : . :.. ... . :. : mKIAA1 ------QGTKKEEIE-GEEVSGL---------IQPAEVFAPKSLVLVSRLDYPEIFRACL 140 150 160 170 160 170 180 190 200 210 mKIAA1 QQLHQAVTSPQPPPLPLESYIYNVLYEVPLPPPGRSLK-FS-GVYGPIICQRPSTNELPL .. . .. . . ::: : : : .: : : : :: :. . : : . ::. mKIAA1 GLIYTVYVDSMS--VSLESLIAN-LCACLVPAAGGSQKLFSLGAGDRQLIQTPLHDSLPV 180 190 200 210 220 230 220 230 240 250 260 270 mKIAA1 FDFPVKEVFELLGVENVFQLFTCALLEFQILLYSQHYQRLMTVAETITALMFPFQWQHVY : .:. ::..::..:: .: : ..::.: .::: . ... .::::..... : mKIAA1 TGTSVALLFQQLGIQNVLNLFCAVLTENKVLLHSASFQRLSDACRALESLMFPLKYSYPY 240 250 260 270 280 290 280 290 300 310 320 mKIAA1 VPILPASLLHFLDAPVPYLMGLHSNGLDDRSKLELPQEANLCFVDVDNHFIELPE--DLP .:::::.::. :..:.:...:.:: : .: .. ..:.:. :..:: : mKIAA1 IPILPAQLLEVLSSPTPFIIGVHSIFKTDVHEL-----LDVIIADLDGGTIKIPECIHLS 300 310 320 330 340 330 340 350 360 370 380 mKIAA1 QFPNKLEFVQEVSEILMAFGVPPEGNLHCSESASKLKRIRASELVSDKRNGNIAGSPLHS ..:. : mKIAA1 SLPEPLLHQTQSALSLILHPDLEVADHAFPPPRTALSHSKMLDKEVRAVFLRLFAQLFQG 350 360 370 380 390 400 >>mKIAA3020 ( 1884 res) mbg15810 (1884 aa) initn: 309 init1: 263 opt: 307 Z-score: 295.7 bits: 67.4 E(): 2.5e-11 Smith-Waterman score: 417; 27.701% identity (31.847% ungapped) in 361 aa overlap (4-356:41-362) 10 20 30 mKIAA1 RTFKSKVLARYPENVDW--NPFDQDAVGMLCMP ....: :.::. :: ::: : .. ..:.: mKIAA3 SPPAPLAMARLADYFVLVAFGPHPRGSGEGQGQILQRFPEK-DWEDNPFPQ-GIELFCQP 20 30 40 50 60 40 50 60 70 80 mKIAA1 KGLAFKTQADPREPQFHAFIITREDGSRTFGFALTFYEEVTSKQ--ICSAMQTLYHMHNA .: . . .: : : . ..: .. : . :::.: : : : .:. : . mKIAA3 SGWQLCPERNP--PTFFVAVLTDINSERHYCACLTFWEPVESTQEVVCTDNAT-----EK 70 80 90 100 110 120 90 100 110 120 130 140 mKIAA1 EYDVLHAPLADGGDQSGMED-GEGIPGTKLQRFNSYDISRDTLYVSKCICLITPMSFMKA : . :::: :. . . . . :: :.. : . :.. .. .. mKIAA3 EEE------ADGGGQARLSSTAPAQPGQ--------------LFAPKTLVLVSRLDHAEV 130 140 150 160 150 160 170 180 190 200 mKIAA1 CRSVLQQLHQAVTSPQPPPLPLESYIYNVLY-EVPLPPPGRSLKFSGVYGPIICQRPSTN :. : .. :. . . ::. : :.: ::: .. :. . : : .. mKIAA3 FRNSLGLIY-AIHV-EGLNVSLENVIGNLLTCTVPLAGGSQRTISLGAGDRQVIQTPLVD 170 180 190 200 210 210 220 230 240 250 260 mKIAA1 ELPLFDFPVKEVFELLGVENVFQLFTCALLEFQILLYSQHYQRLMTVAETITALMFPFQW ::. : .:. ::. ::..:: :: : ..:. :. :::: . . . ::.::... mKIAA3 SLPVSRCSVALLFRQLGITNVLSLFCAALTEHKVLFLSRSYQRLADACRGLLALLFPLRY 220 230 240 250 260 270 270 280 290 300 310 320 mKIAA1 QHVYVPILPASLLHFLDAPVPYLMGLHSNGLDDRSKLELPQEANLCFVDVDNHFIELPE- . .:::::::.::. :..:.:...:... . : . .. .:.:. . .:: mKIAA3 SFTYVPILPAQLLEVLSTPTPFIIGVNAA-----FQAETQELLDVIVADLDGGTVTVPEC 280 290 300 310 320 330 330 340 350 360 370 380 mKIAA1 -DLPQFPNKLEFVQEVSEILMAFGVPPEGNLHCSESASKLKRIRASELVSDKRNGNIAGS .: .:. : : .. .... . :: .: mKIAA3 VHIPPLPEPL---QSQTHNVLSMVLDPELELADLAFPPPTTSASSLKMQDKELRAVFLRL 340 350 360 370 380 390 390 400 410 420 430 440 mKIAA1 PLHSYELLKENETIARLQALVKRTGVSLEKLEVREDPSSNKDFKVQCDEEELRIYQLNIQ mKIAA3 FAQLLQGYRWCLHIVRIHPEPVIRFHKAAFLGQRGLVEDDFLMKVLEGMAFAGFVSERGV 400 410 420 430 440 450 >>mKIAA1608 ( 845 res) mkg10115 (845 aa) initn: 174 init1: 144 opt: 294 Z-score: 287.2 bits: 64.7 E(): 7.4e-11 Smith-Waterman score: 294; 30.675% identity (32.468% ungapped) in 163 aa overlap (174-333:104-260) 150 160 170 180 190 200 mKIAA1 SFMKACRSVLQQLHQAVTSPQPPPLPLESYIYNVLYEVPLPPPGRSLKFSGVYGPIICQR . ..:...:.: :: :...: :.. . mKIAA1 SYLPWFEVFYKLLNILADYTTKRQESQWNELLETLHRLPIPDPGVSVHLS-VHSYFTV-- 80 90 100 110 120 130 210 220 230 240 250 260 mKIAA1 PSTNELPLF--DFPVKEVFELLGVENVFQLFTCALLEFQILLYSQHYQRLMTVAETITAL :.. ::: . . . : : . :.:...:.. : : .::. .. . : . . .:. mKIAA1 PDSRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILIICSKLSTLTACIHGSAAM 140 150 160 170 180 190 270 280 290 300 310 320 mKIAA1 MFPFQWQHVYVPILPASLLHFLDAPVPYLMGLHSNGLDDRSKLELPQEANLCFVDVDNHF ..:. :::::.:.:: :: . ::.:::.:.: . .. .. : .. ...::.. mKIAA1 LYPMYWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRNMALD---DVVILNVDTNT 200 210 220 230 240 330 340 350 360 370 380 mKIAA1 IELP-EDLPQFPNKLEFVQEVSEILMAFGVPPEGNLHCSESASKLKRIRASELVSDKRNG .: : .:: ..:: mKIAA1 LETPFDDLQSLPNDVISSLKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPERD 250 260 270 280 290 300 >>mKIAA0870 ( 1280 res) mth00251 (1280 aa) initn: 311 init1: 219 opt: 288 Z-score: 279.2 bits: 63.8 E(): 2.1e-10 Smith-Waterman score: 298; 25.895% identity (31.757% ungapped) in 363 aa overlap (25-370:121-433) 10 20 30 40 50 mKIAA1 RTFKSKVLARYPENVDWNPFDQDAVGMLCMPKGLAFK----TQADPREPQFHAF : .: .:. : :. . ..:.: .: . mKIAA0 KREKPRMEPWKSHPGDSKGPDSEDVTIPGGVDLLALPQ-LCFSGCVCVASEPKEDYIHFL 100 110 120 130 140 60 70 80 90 100 mKIAA1 IITREDGSRTFGFALTFYEEVTSKQICSAMQTLYHMHNA-EYDVLHAPLADGGDQSGMED ..: :.::.: . .:. . . . : .:. .. : .:. : mKIAA0 VLTDVCGNRTYGVVAQYYRPLHD-EYC-----FYNGKSHWEPSVISARCF---------- 150 160 170 180 190 110 120 130 140 150 160 mKIAA1 GEGIPGTKLQRFNSYDISRDTLYVSKCICLITPMSFMKACRSVLQQLHQAVTSPQPPPLP .: : .:: : : :: .. .: :.. . : mKIAA0 ---VP------FAVCVVSRFPYYNSLKDCLSCLLTHLKLCKDFEVDNH------------ 200 210 220 230 170 180 190 200 210 220 mKIAA1 LESYIYNVLYEVPLPPPGRSLKFSGVYGPIICQRPSTN--ELPLFDFPVKEVFELLGVEN .... : .: :::: :.. . :. :: : :. :. .. . . :. mKIAA0 IKDFAAR-LSLIPSPPPG-PLHLIFNMKPLQVVFPSRADPESPIVDLDLHLPLLCFRPEK 240 250 260 270 280 290 230 240 250 260 270 280 mKIAA1 VFQLFTCALLEFQILLYSQHYQRLMTVAETITALMFPFQWQHVYVPILPASLLHFLDAPV :.:..:: : : .:...:. . : .:: ..: . :.::::..:::: ...: :. ::. mKIAA0 VLQILTCILTEQRIVFFSSDWALLTLMAECFVAYLHPLQWQHTFVPILSGQMLDFVMAPT 300 310 320 330 340 350 290 300 310 320 330 mKIAA1 PYLMGLHSNGLDDRSKLELPQEAN-LCFVDVDNHFIELPE------DLPQFPNKLE--FV .::: : . .. :. .::. : ..:.:. . . :.:. : : :. mKIAA0 SFLMGCHLDHFE-----EVRKEADGLVLIDIDHGSVTCSKSSDDNIDIPDVPLLLAQTFI 360 370 380 390 400 340 350 360 370 380 390 mKIAA1 QEVSEILMAFGVPPEGNL-HCSESASKLKRIRASELVSDKRNGNIAGSPLHSYELLKENE :.:. . . :. .: : : : . :.. :: mKIAA0 QRVQSLQLH----PDLHLAHLSAS-TDLNEGRARRRAWQQTLNCKIQHITLQLLVGIFRE 410 420 430 440 450 460 400 410 420 430 440 450 mKIAA1 TIARLQALVKRTGVSLEKLEVREDPSSNKDFKVQCDEEELRIYQLNIQIREVFANRFTQM mKIAA0 VKNHLNYEHRVFNSEEFLKTRAAGDQQFYKQVLDTYMFHSFLKARLNGRMDAFARMDLDT 470 480 490 500 510 520 >>mKIAA1277 ( 1074 res) mph01932 (1074 aa) initn: 277 init1: 206 opt: 282 Z-score: 274.2 bits: 62.6 E(): 4e-10 Smith-Waterman score: 282; 25.882% identity (28.758% ungapped) in 340 aa overlap (138-462:733-1053) 110 120 130 140 150 160 mKIAA1 EDGEGIPGTKLQRFNSYDISRDTLYVSKCICLITPMSFMKACRSVLQQLHQAVTSPQP-P :... .. : :..... . : . . mKIAA1 VLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLG----CFSLFSKILDEVEKRRGIS 710 720 730 740 750 170 180 190 200 210 220 mKIAA1 PLPLESYIYNVLYEVPLPPPGRSL---KF---SGVYGPIICQRPSTNELPLFDFPVKEVF : .. . .:. :.:.: :... .: ::. .: :: ..: :: . .: mKIAA1 PALVQPLMRSVM-EAPFPALGKTIIVKNFLPGSGTEVIELC-RPLDSRLEHVDF--ESLF 760 770 780 790 800 810 230 240 250 260 270 280 mKIAA1 ELLGVENVFQLFTCALLEFQILLYSQHYQRLMTVAETITALMFPFQWQHVYVPILPASLL :.:... ..:. ::: .... ... . : ....::..::.:::.:.:.:: ... mKIAA1 SSLSVRHLVSVFASLLLERRVIFIADKLSTLSKCCHAMVALIYPFSWQHTYIPVLPPAMI 820 830 840 850 860 870 290 300 310 320 330 mKIAA1 HFLDAPVPYLMGLHSNGLDDRSKLELPQEANLCFVDVDNHFIELPEDLPQ-FPNKLEFVQ .. .:.:.:.:: :..: ::: : : ....:.. :: . .: ::. . mKIAA1 DIVCSPTPFLIGLLSSSLPLLR--ELPLEEVLVVDLINDRFLRQMEDEDSILPRKLQVAL 880 890 900 910 920 930 340 350 360 370 380 390 mKIAA1 E-VSEILMAFGVPPEGN-LHC--SESASKLKRIRASELVSDKRNGNIAGS-PLHSYELLK : . : .. .:. : : . .:.:... . .: . .:.: :: . mKIAA1 EHILEQRNDLACDQDGGPLDCVHGPESSSLSEVVSEAFV--RFFVEIVGHYPL--FLTSG 940 950 960 970 980 400 410 420 430 440 450 mKIAA1 ENETIARLQALVKR-TGVSLEK-LEVREDPSSNKDFKVQCDEEELRIYQLNIQIREVFAN :.... : .:. : .. ::.. ::: . .. . : .: :.::: : . :: :. mKIAA1 EERSLQR-EAFRKAVSSKSLRRFLEVFMETQTFRGF-IQ--ERELR-RQDAKGLFEVRAQ 990 1000 1010 1020 1030 1040 460 470 480 490 500 510 mKIAA1 RFTQMFADYEVFVIQPSQDKESWFTNREQMQNFDKASFLSDQPEPYLPFLSRFLETQMFA .. . . . : mKIAA1 EYLETLPSGEHSGVNKFLKGLGNKMKFLHKK 1050 1060 1070 >>mKIAA0358 ( 1581 res) mbg05815 (1581 aa) initn: 236 init1: 170 opt: 272 Z-score: 262.4 bits: 61.0 E(): 1.8e-09 Smith-Waterman score: 273; 24.873% identity (29.080% ungapped) in 394 aa overlap (170-529:250-620) 140 150 160 170 180 190 mKIAA1 ITPMSFMKACRSVLQQLHQAVTSPQPPPLPLESYIYNVLYEVPLPPPGRSLKFSGVYGPI .:..:: .: :.: :.. . . : mKIAA0 GVQRDTMWRIFTGSLLVEEKSSALLQDLREIEAWIYRLLRS-PVPVSGQK-RVDIEVLPQ 220 230 240 250 260 270 200 210 220 230 240 250 mKIAA1 ICQRPSTNELP------LFDFPVKEVFELLGVENVFQLFTCALLEFQILLYSQHYQRLMT :. : :: : :::.. .:::::. .:..:: ::: ...: :. :. : mKIAA0 ELQQALTFALPDPSRFTLVDFPLHLPLELLGVDACLQVLTCILLEHKVVLQSRDYNALSM 280 290 300 310 320 330 260 270 280 290 300 310 mKIAA1 VAETITALMFPFQWQHVYVPILP---ASLLHFLDAPVPYLMGLHSNGLDDRSKLELPQEA . ...:...:.... .:.:: :: ..: ::.::..:. .. . . ...:... mKIAA0 SVMAFVAMIYPLEYMFPVIPLLPTCMASAEQLLLAPTPYIIGVPASFFLYKLDFKMPDDV 340 350 360 370 380 390 320 330 340 350 360 mKIAA1 NLCFVDVDNHFIELP---EDLPQFP--NKLEFVQEVSEIL--MAFGVPPEGNLHCSESAS : ::.:.. . : : :: .: ..::. ..... : :.... : ::. mKIAA0 WL--VDLDSNRVIAPTNAEVLPILPEPESLELKKHLKQALASMSLNTQPILNLE------ 400 410 420 430 440 370 380 390 400 410 420 mKIAA1 KLKRIRASELVSDKRNGNIAGSPLHSYE-LLKENETIARLQALVKRTGVSLEKLEVREDP :... . :. . .... ..: .. :. :. : . :. . :: mKIAA0 KFHEGQEIPLLLGRPSNDLQSTPSTEFNPLIYGND--------VDSVDVATRVAMVRFFN 450 460 470 480 490 500 430 440 450 460 470 mKIAA1 SSNKDFKVQCDEEELRIYQ---LNIQIREVFANRFTQM-FADYEVFVIQPSQDKESWFTN :.: : . ::.. . .: .:.: : ::. .. : . :. : mKIAA0 SANVLQGFQMHTRTLRLFPRPVVAFQAGSFLASRPRQTPFAE-KLARTQAVEYFGEWILN 510 520 530 540 550 560 480 490 500 510 520 mKIAA1 -------REQMQNFDKASFLSDQPEPY----LPFLSRFLE--TQMFASFIDNKIMCHDDD : . ..:: : ...:.:. : :. : . .:. .. .. . :. mKIAA0 PSNYAFQRIHNNTFDPA-LIGDKPKWYAHQLQPIHYRVYDGNSQLAEAL---SVPPERDS 570 580 590 600 610 530 540 550 560 570 580 mKIAA1 DKDPVLRVFDSRVDKIRLLNVRTPTLRTSMYQKCTTVDEAEKAIELRLAKIDHTAVHPHL :.::. mKIAA0 DSDPTEDSGSDSQDYDDSSSSYSSLGDFVSEMMKCDINGDTPNVDPLTHAALGDASEVEI 620 630 640 650 660 670 >>mKIAA0871 ( 471 res) mbh00987 (471 aa) initn: 127 init1: 127 opt: 147 Z-score: 146.2 bits: 37.8 E(): 0.0053 Smith-Waterman score: 147; 32.000% identity (32.877% ungapped) in 75 aa overlap (801-874:152-225) 780 790 800 810 820 830 mKIAA1 GILLDSERRKSDASAVMSPLRISLIQDMRHIQNIGEIKTDVGKARAWVRLSMEKKLLSRH .... .:: ::..:::.::.. .: ::.. mKIAA0 KTFLGQNKSFWGPLELVEKLVPEAAEITASVKDLPGLKTPVGRGRAWLRLALMQKKLSEY 130 140 150 160 170 180 840 850 860 870 880 mKIAA1 LKQLLSDHELTKKLYKRYAFLRCDDEKEQFLYHLLSFNAVDY-FCFTNVFTTILIPYHIL .: :.. .:: ...:. :.. ..: . :...:..: ::. mKIAA0 MKALINKKELLSEFYEVNALMM-EEEGAIIAGLLVGLNVIDANFCMKGEDLDSQVGVIDF 190 200 210 220 230 240 890 900 910 920 930 940 mKIAA1 IVPSKKLGGSMFTANPWICISGELGETQILQIPRNVLEMTFECQNLGKLTTVQIGHDNSG mKIAA0 SMYLKDGNSSKGSEGDGQITAILDQKNYVEELNRHLNATVNNLQTKVDLLEKSNTKLTEE 250 260 270 280 290 300 1217 residues in 1 query sequences 1767800 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:35:52 2006 done: Mon Mar 27 10:35:54 2006 Scan time: 1.110 Display time: 0.310 Function used was FASTA [version 3.4t11 Apr 17, 2002]