# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbg00277.fasta.nr -Q ../query/mKIAA0940.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0940, 722 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7898428 sequences Expectation_n fit: rho(ln(x))= 6.9147+/-0.000214; mu= 6.3553+/- 0.012 mean_var=188.6260+/-35.616, 0's: 39 Z-trim: 92 B-trim: 0 in 0/67 Lambda= 0.093384 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74181032|dbj|BAE27791.1| unnamed protein produc ( 716) 5036 691.3 3.2e-196 gi|81912025|sp|Q7TN99.1|CPEB3_MOUSE RecName: Full= ( 716) 5024 689.7 9.9e-196 gi|109460088|ref|XP_220043.4| PREDICTED: similar t ( 742) 4998 686.2 1.1e-194 gi|109463839|ref|XP_001080170.1| PREDICTED: simila ( 742) 4983 684.2 4.7e-194 gi|119570483|gb|EAW50098.1| cytoplasmic polyadenyl ( 390) 2734 380.9 5e-103 gi|22209060|gb|AAH36444.1| Cytoplasmic polyadenyla ( 697) 2703 377.0 1.3e-101 gi|73951455|ref|XP_862716.1| PREDICTED: similar to ( 460) 2562 357.8 5.3e-96 gi|74149622|dbj|BAE36436.1| unnamed protein produc ( 561) 2562 357.9 6e-96 gi|73953372|ref|XP_866322.1| PREDICTED: similar to ( 754) 2456 343.7 1.4e-91 gi|75517443|gb|AAI03943.1| CPEB2 protein [Homo sap ( 575) 2429 340.0 1.5e-90 gi|126331890|ref|XP_001363479.1| PREDICTED: simila ( 599) 2391 334.9 5.4e-89 gi|158937340|sp|Q7Z5Q1.3|CPEB2_HUMAN RecName: Full ( 589) 2339 327.9 6.8e-87 gi|148705638|gb|EDL37585.1| cytoplasmic polyadenyl ( 539) 2336 327.4 8.5e-87 gi|118763624|gb|AAI28378.1| Cpeb3 protein [Mus mus ( 477) 2320 325.2 3.5e-86 gi|81913037|sp|Q812E0.1|CPEB2_MOUSE RecName: Full= ( 521) 2320 325.2 3.7e-86 gi|114631783|ref|XP_001145214.1| PREDICTED: cytopl ( 685) 2317 325.0 5.9e-86 gi|149631911|ref|XP_001506788.1| PREDICTED: simila ( 465) 2312 324.1 7.3e-86 gi|55957939|emb|CAI13637.1| cytoplasmic polyadenyl ( 684) 2311 324.2 1e-85 gi|73998014|ref|XP_543930.2| PREDICTED: similar to ( 684) 2310 324.0 1.1e-85 gi|109089927|ref|XP_001088983.1| PREDICTED: simila ( 687) 2299 322.5 3.2e-85 gi|119368634|sp|Q28CH2.1|CPEB3_XENTR RecName: Full ( 632) 2273 319.0 3.4e-84 gi|119613134|gb|EAW92728.1| cytoplasmic polyadenyl ( 452) 2261 317.2 8.4e-84 gi|114631785|ref|XP_001145135.1| PREDICTED: cytopl ( 699) 2207 310.2 1.7e-81 gi|194042485|ref|XP_001927526.1| PREDICTED: cytopl ( 705) 2207 310.2 1.7e-81 gi|119368633|sp|Q8NE35.2|CPEB3_HUMAN RecName: Full ( 698) 2202 309.5 2.7e-81 gi|194678934|ref|XP_880185.2| PREDICTED: similar t ( 698) 2196 308.7 4.8e-81 gi|73998012|ref|XP_849214.1| PREDICTED: similar to ( 698) 2184 307.1 1.5e-80 gi|73953374|ref|XP_866333.1| PREDICTED: similar to ( 749) 2165 304.5 9.1e-80 gi|194205854|ref|XP_001917452.1| PREDICTED: cytopl ( 696) 2162 304.1 1.1e-79 gi|148709832|gb|EDL41778.1| cytoplasmic polyadenyl ( 584) 2132 300.0 1.7e-78 gi|149062769|gb|EDM13192.1| rCG48142 [Rattus norve ( 601) 2131 299.8 1.9e-78 gi|81912024|sp|Q7TN98.1|CPEB4_MOUSE RecName: Full= ( 729) 2113 297.5 1.1e-77 gi|126290868|ref|XP_001370640.1| PREDICTED: simila ( 731) 2113 297.5 1.1e-77 gi|73953382|ref|XP_852818.1| PREDICTED: similar to ( 729) 2112 297.4 1.3e-77 gi|31874681|emb|CAD98072.1| hypothetical protein [ ( 729) 2111 297.2 1.4e-77 gi|119368635|sp|Q17RY0.1|CPEB4_HUMAN RecName: Full ( 729) 2111 297.2 1.4e-77 gi|149611493|ref|XP_001512377.1| PREDICTED: simila ( 731) 2109 297.0 1.7e-77 gi|109079786|ref|XP_001098122.1| PREDICTED: simila ( 729) 2105 296.4 2.4e-77 gi|133777748|gb|AAI03940.2| CPEB2 protein [Homo sa ( 548) 2103 296.0 2.4e-77 gi|148691828|gb|EDL23775.1| cytoplasmic polyadenyl ( 729) 2104 296.3 2.7e-77 gi|47216826|emb|CAG10148.1| unnamed protein produc ( 761) 2095 295.1 6.3e-77 gi|224067461|ref|XP_002196316.1| PREDICTED: cytopl ( 728) 2084 293.6 1.7e-76 gi|194209291|ref|XP_001498950.2| PREDICTED: simila ( 417) 2072 291.7 3.7e-76 gi|194667958|ref|XP_001787349.1| PREDICTED: simila ( 433) 2067 291.1 6e-76 gi|148705639|gb|EDL37586.1| cytoplasmic polyadenyl ( 517) 2068 291.3 6.1e-76 gi|55728717|emb|CAH91098.1| hypothetical protein [ ( 482) 2067 291.1 6.4e-76 gi|75517591|gb|AAI03942.1| CPEB2 protein [Homo sap ( 568) 2067 291.2 7.2e-76 gi|118090698|ref|XP_420779.2| PREDICTED: hypotheti ( 587) 2067 291.2 7.3e-76 gi|149410658|ref|XP_001505802.1| PREDICTED: simila ( 454) 2062 290.4 9.9e-76 gi|220678561|emb|CAX13540.1| novel protein similar ( 299) 2035 286.6 9.4e-75 >>gi|74181032|dbj|BAE27791.1| unnamed protein product [M (716 aa) initn: 5036 init1: 5036 opt: 5036 Z-score: 3679.1 bits: 691.3 E(): 3.2e-196 Smith-Waterman score: 5036; 100.000% identity (100.000% similar) in 716 aa overlap (7-722:1-716) 10 20 30 40 50 60 mKIAA0 QQAAQTMQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 SAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGST 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 WSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 WSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 PQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQPIMTSKPSSSSAVAAAAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQPIMTSKPSSSSAVAAAAAAA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 AASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 KPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSL 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 MDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGR 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 RRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDE 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 SPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGV 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 CYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 CYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMC 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 DECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFR 660 670 680 690 700 710 mKIAA0 WS :: gi|741 WS >>gi|81912025|sp|Q7TN99.1|CPEB3_MOUSE RecName: Full=Cyto (716 aa) initn: 5024 init1: 5024 opt: 5024 Z-score: 3670.3 bits: 689.7 E(): 9.9e-196 Smith-Waterman score: 5024; 99.860% identity (99.860% similar) in 716 aa overlap (7-722:1-716) 10 20 30 40 50 60 mKIAA0 QQAAQTMQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 MQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 SAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGST 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 WSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 WSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 PQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQPIMTSKPSSSSAVAAAAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQPIMTSKPSSSSAVAAAAAAA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 AASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 AASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 KPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 KPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSL 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 MDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGR ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|819 MDMIRTDHEPLKGKHYPNSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGR 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 RRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDE 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 SPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGV 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 CYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 CYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMC 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 DECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 DECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFR 660 670 680 690 700 710 mKIAA0 WS :: gi|819 WS >>gi|109460088|ref|XP_220043.4| PREDICTED: similar to cy (742 aa) initn: 4907 init1: 4907 opt: 4998 Z-score: 3651.2 bits: 686.2 E(): 1.1e-194 Smith-Waterman score: 4998; 98.347% identity (98.898% similar) in 726 aa overlap (4-722:17-742) 10 20 30 40 mKIAA0 QQAAQTMQDDLLMDKSKTQPQSQQQQRQQQQQ-------QQQLQPEP :::::::::::::::::::::::.::::: :::::::: gi|109 MDLHCNWLVAVALDFPAQTMQDDLLMDKSKTQPQSQQQQQQQQQQRQQQQQQQQQLQPEP 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 GAAEAPSTPLSSEIPKPEDSSAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQP ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|109 GAAEAPSTPLSSETPKPEDSSAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQP 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 PPPQEPTAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGT ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGT 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 FSPQIGLAQTQHHQQPPPPAPQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FSPQIGLAQTQHHQQPPPPAPQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 PIMTSKPSSSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVG ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PIMTSKPSSSSAAAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVG 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 VGVGVGVGVPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VGVGVGVGVPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLP 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 FQDRSRPYDTFNLHSLENSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FQDRSRPYDTFNLHSLENSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGI 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 NFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERV 430 440 450 460 470 480 470 480 490 500 510 520 mKIAA0 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESS 490 500 510 520 530 540 530 540 550 560 570 580 mKIAA0 VQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGV 550 560 570 580 590 600 590 600 610 620 630 640 mKIAA0 PRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQ 610 620 630 640 650 660 650 660 670 680 690 700 mKIAA0 HNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGR 670 680 690 700 710 720 710 720 mKIAA0 EFHKPLVKEGGDRPRHVPFRWS :::::::::::::::.:::::: gi|109 EFHKPLVKEGGDRPRQVPFRWS 730 740 >>gi|109463839|ref|XP_001080170.1| PREDICTED: similar to (742 aa) initn: 4892 init1: 4892 opt: 4983 Z-score: 3640.3 bits: 684.2 E(): 4.7e-194 Smith-Waterman score: 4983; 98.072% identity (98.623% similar) in 726 aa overlap (4-722:17-742) 10 20 30 40 mKIAA0 QQAAQTMQDDLLMDKSKTQPQSQQQQRQQQQQ-------QQQLQPEP :::::::::::::::::::::::.::::: :::::::: gi|109 MDLHCNWLVAVALDFPAQTMQDDLLMDKSKTQPQSQQQQQQQQQQRQQQQQQQQQLQPEP 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 GAAEAPSTPLSSEIPKPEDSSAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQP ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|109 GAAEAPSTPLSSETPKPEDSSAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQP 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 PPPQEPTAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGT ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGT 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA0 FSPQIGLAQTQHHQQPPPPAPQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQ :::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FSPQIGSRQTQHHQQPPPPAPQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQ 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA0 PIMTSKPSSSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVG ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PIMTSKPSSSSAAAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVG 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA0 VGVGVGVGVPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VGVGVGVGVPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLP 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA0 FQDRSRPYDTFNLHSLENSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FQDRSRPYDTFNLHSLENSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGI 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA0 NFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERV 430 440 450 460 470 480 470 480 490 500 510 520 mKIAA0 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESS 490 500 510 520 530 540 530 540 550 560 570 580 mKIAA0 VQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGV 550 560 570 580 590 600 590 600 610 620 630 640 mKIAA0 PRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQ 610 620 630 640 650 660 650 660 670 680 690 700 mKIAA0 HNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGR 670 680 690 700 710 720 710 720 mKIAA0 EFHKPLVKEGGDRPRHVPFRWS :::::::::::::::.:::::: gi|109 EFHKPLVKEGGDRPRQVPFRWS 730 740 >>gi|119570483|gb|EAW50098.1| cytoplasmic polyadenylatio (390 aa) initn: 2109 init1: 2109 opt: 2734 Z-score: 2006.0 bits: 380.9 E(): 5e-103 Smith-Waterman score: 2734; 97.739% identity (97.990% similar) in 398 aa overlap (325-722:1-390) 300 310 320 330 340 350 mKIAA0 PISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLH :::::::::::::::::::::::::::::: gi|119 MEDNAFRTDNGNNLLPFQDRSRPYDTFNLH 10 20 30 360 370 380 390 400 410 mKIAA0 SLENSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLENSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALN 40 50 60 70 80 90 420 430 440 450 460 470 mKIAA0 TRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPP . ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 S--------RSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPP 100 110 120 130 140 480 490 500 510 520 530 mKIAA0 DIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGK 150 160 170 180 190 200 540 550 560 570 580 590 mKIAA0 LYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMD 210 220 230 240 250 260 600 610 620 630 640 650 mKIAA0 RLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYV 270 280 290 300 310 320 660 670 680 690 700 710 mKIAA0 LDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRP 330 340 350 360 370 380 720 mKIAA0 RHVPFRWS :::::::: gi|119 RHVPFRWS 390 >>gi|22209060|gb|AAH36444.1| Cytoplasmic polyadenylation (697 aa) initn: 2662 init1: 1385 opt: 2703 Z-score: 1980.5 bits: 377.0 E(): 1.3e-101 Smith-Waterman score: 4689; 94.437% identity (95.549% similar) in 719 aa overlap (7-722:1-697) 10 20 30 40 50 60 mKIAA0 QQAAQTMQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDS ::::::::::::::: ::::::::: : :: ...:::::::::: ::::.. gi|222 MQDDLLMDKSKTQPQPQQQQRQQQQPQ----PESSVSEAPSTPLSSETPKPEEN 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 SAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGST :::::::::.::::::::::::::::::::::::::::::::::::.::::::::::::: gi|222 SAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSPSFGST 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 WSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 WSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPA 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 P--QPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAA-YGHQPIMTSKPSSSSAVAAAA : :: :::::::::: ::::::::::::::::::::: ::::::::::::::::::::: gi|222 PAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAA 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 AAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 AAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPIS 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 PLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLE ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|222 PLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFWTDNGNNLLPFQDRSRPYDTFNLHSLE 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 NSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 NSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALN--- 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 YGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDID .::::::::::::::::::::::::::::::::::::::::::::: gi|222 --------------NAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDID 410 420 430 440 450 480 490 500 510 520 530 mKIAA0 EDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 EDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYL 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA0 CVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLY ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 CVSSP-IKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLY 520 530 540 550 560 570 600 610 620 630 640 650 mKIAA0 GGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 GGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDD 580 590 600 610 620 630 660 670 680 690 700 710 mKIAA0 QMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|222 QMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHV 640 650 660 670 680 690 720 mKIAA0 PFRWS ::::: gi|222 PFRWS >>gi|73951455|ref|XP_862716.1| PREDICTED: similar to cyt (460 aa) initn: 2434 init1: 1835 opt: 2562 Z-score: 1879.9 bits: 357.8 E(): 5.3e-96 Smith-Waterman score: 2562; 78.936% identity (91.064% similar) in 470 aa overlap (266-722:3-460) 240 250 260 270 280 290 mKIAA0 AAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNP ::... ::: ::. : ..:.:. .: gi|739 MSWGAVH-GRDHRRT-G-----NMGIPGTMNQ 10 20 300 310 320 330 340 350 mKIAA0 ISPLKKPFSSNVIAPPKFPRAAP-LTSKSWMEDNAFRTDNGNN-LLPFQDRSRPYDTFNL :::::::::.:::::::: :..: :: :::.:::.:::::..: :::.::::: ::..:. gi|739 ISPLKKPFSGNVIAPPKFTRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQDRSRMYDSLNM 30 40 50 60 70 80 360 370 380 390 400 mKIAA0 HSLENSLMDMIRTDHEPLKGKHYPPSGPPMSFADIMWRN-------HFAGRMGINFHHPG :::::::.:..:..:.::::.::: : . .::..::: :: . : .. ::: gi|739 HSLENSLIDIMRAEHDPLKGSHYPEMG--ICLADLIWRNRTPTLFLHFKKQTGRHYPHPG 90 100 110 120 130 140 410 420 430 440 450 460 mKIAA0 TDNIMALNTRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRC----QNGERVER :::.. ::.::::::::::::::..:..:::.:.::. . :.::: : :::::.:: gi|739 TDNLLMLNARSYGRRRGRSSLFPIDDGLLDDGHNDQV--GVLNSPT-CYSAHQNGERIER 150 160 170 180 190 200 470 480 490 500 510 520 mKIAA0 YSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQ .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQ 210 220 230 240 250 260 530 540 550 560 570 580 mKIAA0 ALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPR ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPR 270 280 290 300 310 320 590 600 610 620 630 640 mKIAA0 PLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|739 PLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG 330 340 350 360 370 380 650 660 670 680 690 700 mKIAA0 DIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREF :::::::::::::::::::::::.::::::::::::::::::::::.:::.::::::::: gi|739 DIDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREF 390 400 410 420 430 440 710 720 mKIAA0 HKPLVKEGGDRPRHVPFRWS ::::::::.::::.. :::. gi|739 HKPLVKEGADRPRQIHFRWN 450 460 >>gi|74149622|dbj|BAE36436.1| unnamed protein product [M (561 aa) initn: 3869 init1: 2557 opt: 2562 Z-score: 1878.9 bits: 357.9 E(): 6e-96 Smith-Waterman score: 3816; 95.876% identity (95.876% similar) in 582 aa overlap (7-588:1-559) 10 20 30 40 50 60 mKIAA0 QQAAQTMQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDS 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 SAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SAVPALSPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGST 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 WSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 WSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 PQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQPIMTSKPSSSSAVAAAAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQPIMTSKPSSSSAVAAAAAAA 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 AASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 KPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSL 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 MDMIRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGR ::::::::::::: :::::::::::::::::::::::: gi|741 MDMIRTDHEPLKG-----------------------RMGINFHHPGTDNIMALNTRSYGR 360 370 380 390 430 440 450 460 470 480 mKIAA0 RRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RRGRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDE 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA0 ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVS 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA0 SPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGV :::::::::::::::::::::::::::::::::::::::::::::: : gi|741 SPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAGEWK 520 530 540 550 560 610 620 630 640 650 660 mKIAA0 CYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMC >>gi|73953372|ref|XP_866322.1| PREDICTED: similar to cyt (754 aa) initn: 2602 init1: 1847 opt: 2456 Z-score: 1800.3 bits: 343.7 E(): 1.4e-91 Smith-Waterman score: 2827; 60.541% identity (78.243% similar) in 740 aa overlap (3-722:66-754) 10 20 30 mKIAA0 QQAAQTMQDDLLMDKSKTQPQSQQQQRQQQQQ :....::..: .. . .::::..:. . gi|739 NATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEIL---GSEKAKSQQQEQQDPLE 40 50 60 70 80 90 40 50 60 70 80 90 mKIAA0 QQQLQPEPGAAEAPSTPLSSEIPKPEDSSAVPALSPASAPPAPNGPDKMQMESPLLPGLS .:::.: :: :: : :: : :.... .. :: .:...:::.: :.. gi|739 KQQLSPSPGQ-EAGILP-ESEKAKSEENQG------DNSSENGNGKEKIRIESPVLTGFD 100 110 120 130 140 100 110 120 130 140 mKIAA0 FHQPPQQPPPPQEPTAPGASLSPSFGSTWS-----TGTTNAVED-SFF-QGITPV----N ... : :. ..::. .: :.:: ...: :: ::: :: .:. : gi|739 YQEATGLGTSTQPLTSSASSLT-GF-SNWSAAIAPSSSTIINEDASFFHQGGVPAASANN 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA0 GTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPAPQPPQPAQPPQAQPSQQRRSP :..:::::::::.: :::.:::::: .::: :. :. : ..: .:::::: gi|739 GALLFQNFPHHVSPGFGGSFSPQIG-PLSQHH-------PHHPH-FQHHHSQHQQQRRSP 210 220 230 240 250 210 220 230 240 250 mKIAA0 ASPSQAPYAQRSAAAYGHQPIMTS---KPSSSSAVAAAAAAAAASSASSSWNTHQSVNAA ::: :...:.:: ... : ... :: : .. . . . ::::. gi|739 ASPHPPPFTHRNAA-FNQLPHLANNLNKPPSP----WSSYQSPSPTPSSSWSPG------ 260 270 280 290 300 260 270 280 290 300 310 mKIAA0 WSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSNVIAPPKFPR-AA .. . ::: : ::: ::... :. .::: :::::: :.:: : :. : .. gi|739 -GGGYGGWGGSQ-GRDHRRGLNGGI-------TPLNSISPLKKNFASNHIQLQKYARPSS 310 320 330 340 350 320 330 340 350 360 370 mKIAA0 PLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSLMDMIRTDHEPLKGKHYP .. ::::::. :.: :..:: :: : ::..::::.::.:..:.... .::. gi|739 AFAPKSWMEDSLNRAD---NIFPFPDRPR---TFDMHSLESSLIDIMRAENDSIKGRSRL 360 370 380 390 400 380 390 400 410 420 430 mKIAA0 PSGPPM--SFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDAFL :.: :: :. .:.::: .:.:. :. .::.:. . .:.:.::::::.:::::.::.:: gi|739 PAGRPMWDSILEIIWRNLLASRL--NYSYPGSDSSLLINARTYGRRRGQSSLFPMEDGFL 410 420 430 440 450 460 440 450 460 470 480 490 mKIAA0 DDSHGDQALSSGLSSPTRC---QNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLV ::..::: : :::.:: .: :::::::::::::::::::::::::::::::::::::. gi|739 DDGRGDQPLHSGLGSP-HCFTHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLI 470 480 490 500 510 520 500 510 520 530 540 550 mKIAA0 VDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIR ::::::::::::::::::::::::.:::::::::::.::::::::::::::::::::::: gi|739 VDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIR 530 540 550 560 570 580 560 570 580 590 600 610 mKIAA0 PWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELK 590 600 610 620 630 640 620 630 640 650 660 670 mKIAA0 YPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKF :::::::::::::::::::::::::::::..:::::::::::::::.::::::.:::::: gi|739 YPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKF 650 660 670 680 690 700 680 690 700 710 720 mKIAA0 APFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS ::::::::::::::::::::.:::::::::::::::::::::::. :::. gi|739 APFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN 710 720 730 740 750 >>gi|75517443|gb|AAI03943.1| CPEB2 protein [Homo sapiens (575 aa) initn: 2503 init1: 1835 opt: 2429 Z-score: 1782.0 bits: 340.0 E(): 1.5e-90 Smith-Waterman score: 2542; 63.191% identity (75.987% similar) in 633 aa overlap (138-722:5-575) 110 120 130 140 150 160 mKIAA0 APGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGL .: . . .. ..: .::.: .::: .. gi|755 MPPPSPDSENGFYPGLPSSMNPAFFPSFSP-VSP 10 20 30 170 180 190 200 210 mKIAA0 AQTQHHQQPPP----PAPQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAAY------ . ::: : ::: :: : : : :.::::.::. : .:::. gi|755 HGCTGLSVPPPAMNIPQQQPPPPAAPQQ--P-QSRRSPVSPQLQQQHQAAAAAFLQQRNS 40 50 60 70 80 90 220 230 240 250 260 270 mKIAA0 --GHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDP :::.. ..: :..::: ..:.. : ::... ::: gi|755 YNHHQPLLKQSP---------------------WSNHQS--SGWGTGSMSWGAMH-GRDH 100 110 120 280 290 300 310 320 330 mKIAA0 RRAVGVGVGVGVGVPSPLNPISPLKKPFSSNVIAPPKFPRAAP-LTSKSWMEDNAFRTDN ::. : ..:.:. .: :::::::::.:::::::: :..: :: :::.:::.::::: gi|755 RRT-----G-NMGIPGTMNQISPLKKPFSGNVIAPPKFTRSTPSLTPKSWIEDNVFRTDN 130 140 150 160 170 180 340 350 360 mKIAA0 GNN-LLPFQ------------------------------DRSRPYDTFNLHSLENSLMDM ..: :::.: :::: ::..:.:::::::.:. gi|755 NSNTLLPLQVRSSLQLPAWGSDSLQDSWCTAAGTSRIDQDRSRMYDSLNMHSLENSLIDI 190 200 210 220 230 240 370 380 390 400 410 420 mKIAA0 IRTDHEPLKGKHYPPSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGRRRG .:..:.::::. ... ::::::.. ::.:::::::: gi|755 MRAEHDPLKGR-------------------------LSYPHPGTDNLLMLNARSYGRRRG 250 260 270 430 440 450 460 470 mKIAA0 RSSLFPFEDAFLDDSHGDQALSSGLSSPTRC----QNGERVERYSRKVFVGGLPPDIDED ::::::..:..:::.:.::. . :.::: : :::::.::.:::::::::::::::: gi|755 RSSLFPIDDGLLDDGHSDQV--GVLNSPT-CYSAHQNGERIERFSRKVFVGGLPPDIDED 280 290 300 310 320 330 480 490 500 510 520 530 mKIAA0 EITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCV :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|755 EITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCV 340 350 360 370 380 390 540 550 560 570 580 590 mKIAA0 SSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|755 SSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGG 400 410 420 430 440 450 600 610 620 630 640 650 mKIAA0 VCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQM ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|755 VCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQM 460 470 480 490 500 510 660 670 680 690 700 710 mKIAA0 CDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPF ::::::.::::::::::::::::::::::.:::.:::::::::::::::::.::::.. : gi|755 CDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHF 520 530 540 550 560 570 720 mKIAA0 RWS ::. gi|755 RWN 722 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 05:20:29 2009 done: Tue Mar 17 05:28:29 2009 Total Scan time: 1059.520 Total Display time: 0.260 Function used was FASTA [version 34.26.5 April 26, 2007]