FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1361.ptfa, 345 aa vs ./tmplib.26680 library 1768672 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.8627+/-0.00744; mu= 1.9478+/- 0.493 mean_var=319.0109+/-76.606, 0's: 0 Z-trim: 5 B-trim: 0 in 0/36 Lambda= 0.0718 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0881 ( 1070 res) mpm03231 (1070) 1358 154 3.2e-38 >>mKIAA0881 ( 1070 res) mpm03231 (1070 aa) initn: 1346 init1: 1249 opt: 1358 Z-score: 778.5 bits: 154.1 E(): 3.2e-38 Smith-Waterman score: 1465; 65.574% identity (69.971% ungapped) in 366 aa overlap (1-345:707-1070) 10 20 30 mKIAA1 ESMQELEFRHLNTIQKMRCELIRLQHQTEL :. .:::.:.:...:. : :: :::::::: mKIAA0 HSLDQDLLREDLNKKQTQKDLECALLLRQHEATRELELRQLQAVQRTRAELTRLQHQTEL 680 690 700 710 720 730 40 50 60 70 80 90 mKIAA1 TNQLEYNKRRERELRRKHVMEVRQQPKSLKSKELQIKKQFQDTCKIQTRQYKALRNHLLE ::::::::::.:::.::. .::::::::::::::::::::.::::::::::::: :::: mKIAA0 GNQLEYNKRREQELRQKHAAQVRQQPKSLKSKELQIKKQFQETCKIQTRQYKALRAHLLE 740 750 760 770 780 790 100 110 120 130 140 150 mKIAA1 TTPKSEHKAVLKRLKEEQTRKLAILAEQYDHSINEMLSTQALRLDEAQEAECQVLKMQLQ ::::..::..::::::::::::::::::::.::.::::.:::::::.:::: :.:..::: mKIAA0 TTPKAQHKSLLKRLKEEQTRKLAILAEQYDQSISEMLSSQALRLDETQEAEFQALRQQLQ 800 810 820 830 840 850 160 170 180 190 200 210 mKIAA1 QELELLNAYQSKIKMQAEAQHDRELRELEQRVSLRRALLEQKIEEEMLALQNERTERIRS ::::::::::::::...:.::.::::::::::.::::::::..:::.::::. :.::::: mKIAA0 QELELLNAYQSKIKIRTESQHERELRELEQRVALRRALLEQRVEEELLALQTGRSERIRS 860 870 880 890 900 910 220 230 240 250 260 mKIAA1 LLERQAREIEAFDSESMRLGFSNMVLSNLSPEAFSHSYPG---ASSWSHNPTGGPGPHWG :::::::::::::.::::::::.:.:... :: ...::. : .: :. : ::. mKIAA0 LLERQAREIEAFDAESMRLGFSSMALGGIPAEAAAQGYPAPPPAPAWPSRPVPRSGAHWS 920 930 940 950 960 970 270 280 290 300 310 mKIAA1 H---PMGGTPQAWGHPM---QGGPQPWGHPSGPMQ-GVPRGSSMGV-RNSPQALRRTASG : : : : :: .: :: : : : : :.:::... . ::::: :::.::: mKIAA0 HGPPPPGMPPPAWRQPALLAPPGPPNWLGP--PTQSGTPRGGALLLLRNSPQPLRRAASG 980 990 1000 1010 1020 1030 320 330 340 mKIAA1 GRTEQG----------MSRSTSVTSQISNGSHMSYT : . .. .::::::.:.: ::: :. mKIAA0 GSSGENVGPPAAVPGPLSRSTSVASHILNGSSHFYS 1040 1050 1060 1070 345 residues in 1 query sequences 1768672 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:42:14 2006 done: Mon Mar 27 10:42:15 2006 Scan time: 0.550 Display time: 0.020 Function used was FASTA [version 3.4t11 Apr 17, 2002]