FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0334.ptfa, 857 aa vs ./tmplib.26680 library 1768160 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 10.9469+/-0.00813; mu= -14.0711+/- 0.537 mean_var=363.3860+/-87.541, 0's: 0 Z-trim: 15 B-trim: 0 in 0/36 Lambda= 0.0673 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0827 ( 1033 res) mbg05617 (1033) 319 46 3.7e-05 mKIAA4051 ( 721 res) mbh02817 ( 721) 294 43 0.00015 mKIAA0192 ( 1146 res) msp04171 (1146) 293 43 0.00023 mKIAA1557 ( 1161 res) mph01346 (1161) 257 40 0.0026 >>mKIAA0827 ( 1033 res) mbg05617 (1033 aa) initn: 286 init1: 159 opt: 319 Z-score: 184.9 bits: 45.5 E(): 3.7e-05 Smith-Waterman score: 344; 27.703% identity (32.368% ungapped) in 444 aa overlap (429-857:453-847) 400 410 420 430 440 450 mKIAA0 ETAADKSQDSGSDNRINTVSLKEALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIP :: :.::. . .. :. :.:: . : mKIAA0 QQSPVYQQPSHMMSALPTNEDMQMQCELFSSP-PAASGNETSTTTTPQVATPGSTMFQTP 430 440 450 460 470 480 460 470 480 490 500 510 mKIAA0 T-----DTSTPPRQ-HLPAHEKMTQRRSSFSSQSINSQSVGPSLTQPAMSQAANLPIPQG . .:.. .: . . . :.: . : .:: : : :. :: : :: mKIAA0 SSGDGEETGAQAKQIQNSVFQTMVQMQRSGDSQP---QVNLFSSTKNIMSVQNNGTQQQG 490 500 510 520 530 520 530 540 550 560 570 mKIAA0 MSQFQFSAQLGAMQHLKDQLEQRTRMIEANIHRQQEELRKIQEQLQMVHGQGLQMFLQQS : :: .... ..: . .. :.. .:.. . :. . :. : ..:. .... mKIAA0 NSLFQQGSEMMSLQ--SGNFLQQSSHSQAQLFHPQNPIADAQNLSQETQGS----IFHSP 540 550 560 570 580 590 580 590 600 610 620 mKIAA0 NPGLNF-----GSVQLSSGNSNIQQLTPVNMQGQVVPANQVQSGHISTGQHMIQQQTLQS :: .. .: ::. . . :. : .::. :: .: :: .: .: :.. ::. mKIAA0 NPIVHSQTSTASSEQLQPSMFHSQNTIAV-LQGSSVPQDQ-QSPNIFLSQSSINN--LQT 600 610 620 630 640 630 640 650 660 670 680 mKIAA0 TSTQQSQQSVMSGHSQQTSLPSQTPSTLTAPLYNTMVISQPAAGSMVQIPSSMPQNSTQS ... : .: .: . :.:. .:: .: : :: . : : : . :. mKIAA0 NTVAQEEQ--ISFFAAQNSI---------SPLQSTSNTEQQAA--FQQQP---PISHIQT 650 660 670 680 690 690 700 710 720 730 740 mKIAA0 ATVTTFTQDRQIRFSQGQQLVTKLVTAPVACGAVMVPSTMLMGQVVTAYPTFATQQQQAQ .. :.. .:: : :: :. . :. : ..: : : ::. . mKIAA0 PILS---QEQAQPSQQG------LFQPQVALGS-LPPNPMPQNQ---QGPIFQTQRPIVG 700 710 720 730 750 760 770 780 790 800 mKIAA0 TLSVTQQQQQQQQQPPQQQQQQQQSSQEQQLPSVQQPAQAQLG---QPPQQFLQTSRLLH : . .:.::::: ::::::::..:.:.. .: :.: .. ::: ... . . mKIAA0 MQSNSPSQEQQQQQQQQQQQQQQQQQQQQSILFSNQNAMATMASQKQPPPNMMFSP---N 740 750 760 770 780 790 810 820 830 840 850 mKIAA0 GNP-STQLILSAAFPLQQSTFPPSHHQQHQPQQQQQLPRHRTDSLTDPSKVQPQ :: ..: . .. :::.. : .:..::.: :. : ..:: .:. .: . mKIAA0 QNPMASQEQQNQSIFHQQSNMAP-MNQEQQPMQFQNQPT--VSSLQNPGPTQSESPQTSL 800 810 820 830 840 850 mKIAA0 FHSSPQIQLVQGSPSSQDQQVTLFLSPASMSALQTSINQPDMQQSPLYSPQNNIPGIQGS 860 870 880 890 900 910 >>mKIAA4051 ( 721 res) mbh02817 (721 aa) initn: 263 init1: 117 opt: 294 Z-score: 173.8 bits: 43.0 E(): 0.00015 Smith-Waterman score: 537; 24.017% identity (27.805% ungapped) in 712 aa overlap (21-646:3-703) 10 20 30 40 50 mKIAA0 CVMVFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKS--EKKRRDQFNVLIKE .:.: . :... :: . . .:.: :..::..... : : mKIAA4 FINSVFRSDDEQSSADKERLARENHSEIERRRRNKMTAYITE 10 20 30 40 60 70 80 90 100 110 mKIAA0 LGSMLPGN---ARKMDKSTVLQKSIDFLRKHKET-TAQSDASEIRQDWKPTFLSNEEFTQ :..:.: ::: :: :.:. ... ... . : ....:.: .::.::...:. . mKIAA4 LSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGS-----YKPSFLTDQELKH 50 60 70 80 90 120 130 140 150 160 170 mKIAA0 LMLEALDGFFLAIMTD-GSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILS :.::: :::.. . . : ..:::.::: .:.. :. ..... . . ... . :: mKIAA4 LILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLS 100 110 120 130 140 150 180 190 200 210 mKIAA0 THL---------LESDSLTPEYLKSKNQL------EFCCHMLRGT--IDPKEPSTYEYVR : :.. .. : .:. .. : :.: :: .:: . ..: mKIAA4 TSENALTGRVLDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGTSSVDPVSMNRLSFLR 160 170 180 190 200 210 220 230 240 250 mKIAA0 F-----IGNFKSLTSVSTSTH-NGF------EGTIQRTHRP--SYEDRVCFVATVRL--- .:. : . .: .:. :. : . .. :.:: :: mKIAA4 NRCRNGLGSVKEGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQVT 220 230 240 250 260 270 260 270 280 290 300 310 mKIAA0 ATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDD ..:. .: .. .:.: : :::..: : :.::: .:: : :.:: . .. : .: mKIAA4 SSPNCT-DMSNICQPTE-FISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPED 280 290 300 310 320 330 320 330 340 350 360 370 mKIAA0 LENLAKCHEHLMQY-GKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV . : ..... :. : ..:: .: ..:.:..: . . .... :.:.::.: : mKIAA4 QQLLRDSFQQVVKLKGQVLSVMFRFRSKTREWLWMRTSSFTFQNPYSDEIEYIICTNTNV 340 350 360 370 380 390 380 390 400 410 420 mKIAA0 --SYAEVRAER-----RRELGIEESLP-ETAADK---SQDSGSDNRINTVSLKEALERFD : : : : .:: .: : .. . :.. . .... : ...: .. mKIAA4 KNSSQEPRPTLSNTIPRSQLGPTANLSLEMGTGQLPSRQQQQQHTELDMVPGRDGLASYN 400 410 420 430 440 450 430 440 450 460 470 mKIAA0 HS-----PTPSASSRSSR---KSSHTAVSD-----PSSTPTKIPTDTSTPPRQHLPAHEK :: :. ::.:. :. :: ..: : :. ... . .:: .. mKIAA4 HSQVSVQPVASAGSEHSKPLEKSEGLFAQDRDPRFPEIYPSITADQSKGISSSTVPATQQ 460 470 480 490 500 510 480 490 500 510 mKIAA0 MTQRRSSFS-----SQSINSQSVGPSLT--QPAMSQAANL--------PIPQGMSQFQFS . .. ::: .... .... : .: ::. : . : : . . : mKIAA4 LFSQGSSFPPNPRPAENFRNSGLTPPVTIVQPSSSAGQILAQISRHSNPAQGSAPTWTSS 520 530 540 550 560 570 520 530 540 550 560 570 mKIAA0 AQLGAMQHLKDQLEQRTRMIEANIHRQQE--ELRKIQEQLQMVHGQGLQMFLQQSNPGLN .. : .. : .:: . ... : . .. . ..: . : : : mKIAA4 SRPGFAAQVPTQATAKTRSSQFGVNNFQTSSSFSAMSLPGAPTASSGTAAYPALPNRGSN 580 590 600 610 620 630 580 590 600 610 620 630 mKIAA0 FGSVQLSSGNSNIQ-QLTPVNMQGQVVPANQVQSGH--ISTGQHMIQQQTLQSTSTQQSQ : .:... : : .. : : : : :. : :.... .:: :. : . mKIAA4 FPP---ETGQTTGQFQARTAEGVG-VWPQWQGQQPHHRSSSSEQHVQQTQAQAPSQPEVF 640 650 660 670 680 690 640 650 660 670 680 690 mKIAA0 QSVMSGHSQQTSLPSQTPSTLTAPLYNTMVISQPAAGSMVQIPSSMPQNSTQSATVTTFT : ..: ..:.. mKIAA4 QEMLSMLGDQSNTYNNEEFPDLTMFPPFSE 700 710 720 >>mKIAA0192 ( 1146 res) msp04171 (1146 aa) initn: 748 init1: 224 opt: 293 Z-score: 170.6 bits: 43.1 E(): 0.00023 Smith-Waterman score: 316; 27.069% identity (31.347% ungapped) in 447 aa overlap (424-857:739-1137) 400 410 420 430 440 450 mKIAA0 EESLPETAADKSQDSGSDNRINTVSLKEALERFDHSPTPSASSRSSRKSSHTAVSDPSST :: .: . :. . :. ... : mKIAA0 PPAPALLEPEKKAPEPPKTDKPGAAPPSTEERKKKSTKGKKRSQPATKNEDYGMGPGRSG 710 720 730 740 750 760 460 470 480 490 500 510 mKIAA0 P--TKIPTDTSTPPRQHLPAHEKMTQRRSSFSSQSINSQSVGPSLTQPAMSQAANLPIPQ : . .: : .: .. : .. .:. . :: . .: . . ::. . mKIAA0 PYGVTVPPDLLHHANPGSISHLSYRQSSMGLYTQNQPLPAGGPRV-DPY--RPVRLPMQK 770 780 790 800 810 820 520 530 540 550 560 570 mKIAA0 GMSQFQFSAQLGAMQHLKDQLEQRTRMIEANIHRQQEELRKIQEQLQMVHGQGLQMFLQQ .. . . : . . :: . .....::: : . .:: :.. :: mKIAA0 LPTRPTYPGVLPTTMSTVMGLEPSSY--KTSVYRQQ--------QPTVPQGQRLRQQLQA 830 840 850 860 870 580 590 600 610 620 630 mKIAA0 SNPGLNFGSVQLSSGNSNIQQLTPVNMQGQVVPANQVQSGHISTGQHMIQQQTLQSTSTQ . . : :.:...:.:: . : :...:. : .:. :: ..:. mKIAA0 KIQS------QGMLGQSSVHQMTPSSSYGL-----QTSQGYTSYVSHVGLQQHTGPAGTM 880 890 900 910 920 640 650 660 670 680 690 mKIAA0 QSQQSVMSGHSQQTSLPSQTPSTLTAPLYNTMVISQPAAGSMVQIPS-SMPQNSTQSATV . .:.. :.. :: .: ::. : . . ..:.. : :. . .::: . mKIAA0 VPPS--YSSQPYQSTHPSTNP-TLVDPTRHLQ--QRPSGYVHQQAPTYGHGLTSTQRFSH 930 940 950 960 970 700 710 720 730 740 750 mKIAA0 TTFTQDRQIRFSQGQQLVTKLVTAPVACGAVMVPSTMLMGQVVTAYPTFATQQQQAQTLS :. : .. : .: : . : : : :: .. : :::: : . mKIAA0 QTLQQTPMM----GT--MTPLSAQGVQAG---VRSTSIL-------PEQQQQQQQQQQQQ 980 990 1000 1010 1020 760 770 780 790 800 mKIAA0 VTQQQQQQQQQPPQQQQQQQQ-----SSQEQQLPSVQQPAQAQLGQPPQQFLQTSRLLHG ::::::::: :::::::: ..:.::. :: : : : :: : .. . mKIAA0 QQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQQMLRQQQQQQQQQQQQQQQQQQQQQQQQQ 1030 1040 1050 1060 1070 1080 810 820 830 840 850 mKIAA0 NPSTQLILSAAFPLQQSTFPPSHHQQ--HQPQQQQQ---LPRHRTDSLTDPSKVQPQ . : .:: : : :. ..: .: ::::: : :. ..: :..::: mKIAA0 QQPHQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQL---SNTQPQPST 1090 1100 1110 1120 1130 1140 mKIAA0 NIFGRY >>mKIAA1557 ( 1161 res) mph01346 (1161 aa) initn: 364 init1: 106 opt: 257 Z-score: 151.7 bits: 39.6 E(): 0.0026 Smith-Waterman score: 257; 23.982% identity (27.532% ungapped) in 442 aa overlap (430-840:19-434) 400 410 420 430 440 450 mKIAA0 TAADKSQDSGSDNRINTVSLKEALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPT :.::. ......: :.... . : .. mKIAA1 SFPVQGIHTVAQTVSRIPPNPSVHTHQQQNSPVTVIQNKAPIPCEVVK 10 20 30 40 460 470 480 490 500 510 mKIAA0 DT---STPPRQHLPAHEKM---TQRRSSFSSQSINSQSVGPSLTQPAMSQAANLPIPQGM : .. :. .:. .. . : ...: . : : .: . . . .: :. . mKIAA1 ATVIQNSVPQTAVPVSISVGGAPAQNSVGQNHSAGPQPVTVVNSQTLLHHPSVMPQPSPL 50 60 70 80 90 100 520 530 540 550 560 570 mKIAA0 -SQFQFSAQLGAMQHLKDQLEQRTRMIEANIHRQQEELRKIQEQLQMVHGQGLQMFLQQS . .. :. . .: ..::. : : .: . : .:: :.. . mKIAA1 HTVVPGQVPSGTPVTVIQQTVPQSRMF----GRVQ----SIPACTSTV-SQGQQLITTSP 110 120 130 140 150 580 590 600 610 620 mKIAA0 NPGLNFGSVQLSSGNS--NIQQLTP----VNMQGQVVPANQVQSGHISTGQHMIQQQTLQ .: .. .: : ..:.. . ..: .. ...: :..::. ...::: . :. mKIAA1 QP-MHTSSQQTAAGSQPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQVV----TIA 160 170 180 190 200 210 630 640 650 660 670 680 mKIAA0 STSTQQSQQSVMSGHSQQTSLPSQ--TPSTLTAPLYNTMVISQPAAGSMVQIPSSMPQNS .. . : .. ... . . :::: .::.. :. . . ::: :.: . . :.. mKIAA1 GVPSPQPSRVGFQNIAPKP-LPSQQVSPSVVQQPIQQPQ---QPAQQSVVIVSQPAQQGQ 220 230 240 250 260 270 690 700 710 720 730 740 mKIAA0 TQSATVTTFTQDRQIRFSQGQ--QLVTKLVTAPVACGAVMVPSTMLMGQVVTAYPTFATQ . . .. .. . :: ::. . .: . . . :.. .:: ::. . .: mKIAA1 AYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPPTN---NQVPTAMSSSSTL 280 290 300 310 320 750 760 770 780 790 mKIAA0 QQQ------AQTLSVTQQQQQQQQQPPQQQQQQQQSSQEQQLPSVQQPAQ--AQLGQP-P :.: .: ::: .:::::.. :: : : .: ::. :: : : .::: : mKIAA1 QSQGPPPTVSQMLSVKRQQQQQHSPAAPAQQVQVQVQQPQQVQVQVQPQQPSAGVGQPAP 330 340 350 360 370 380 800 810 820 830 840 mKIAA0 QQFLQTSRLL--HGNPST---QLILSAAFPLQQSTFPPSHHQQHQPQQQQQLPRHRTDSL .. ..:: . .::: .::: : : ::.. . .:: :. mKIAA1 NESSLIKQLLLPKRGPSTPGGKLIL----PAPQIP-PPNNARAPSPQVVYQVANNQAAGF 390 400 410 420 430 440 850 mKIAA0 TDPSKVQPQ mKIAA1 GVQGQTPAQQLLVGQQNVQLVQSAMPPAGGVQTVPISNLQILPGPLISNSPATIFQGTSG 450 460 470 480 490 500 857 residues in 1 query sequences 1768160 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:18:00 2006 done: Mon Mar 27 10:18:01 2006 Scan time: 0.930 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]