# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbf01207.fasta.nr -Q ../query/mKIAA1093.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1093, 571 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7906645 sequences Expectation_n fit: rho(ln(x))= 6.7341+/-0.000205; mu= 5.8881+/- 0.011 mean_var=129.6164+/-24.775, 0's: 35 Z-trim: 90 B-trim: 440 in 2/65 Lambda= 0.112653 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74183955|dbj|BAE37027.1| unnamed protein produc ( 731) 3942 652.0 1.8e-184 gi|26342470|dbj|BAC34897.1| unnamed protein produc ( 812) 3942 652.0 1.9e-184 gi|159110982|ref|NP_796098.3| trinucleotide repeat (1774) 3942 652.3 3.5e-184 gi|67782332|ref|NP_659061.2| trinucleotide repeat (1810) 3942 652.3 3.5e-184 gi|148672646|gb|EDL04593.1| trinucleotide repeat c (1817) 3942 652.3 3.5e-184 gi|74184073|dbj|BAE37059.1| unnamed protein produc ( 838) 3930 650.1 7.6e-184 gi|194226868|ref|XP_001500122.2| PREDICTED: trinuc (1714) 3872 640.9 9e-181 gi|73969032|ref|XP_859375.1| PREDICTED: similar to ( 997) 3843 636.0 1.6e-179 gi|20306948|gb|AAH28626.1| TNRC6B protein [Homo sa (1029) 3841 635.7 2e-179 gi|73969030|ref|XP_859340.1| PREDICTED: similar to (1726) 3843 636.2 2.4e-179 gi|73969036|ref|XP_538361.2| PREDICTED: similar to (1779) 3843 636.2 2.4e-179 gi|119580772|gb|EAW60368.1| trinucleotide repeat c (1527) 3841 635.8 2.7e-179 gi|38258268|sp|Q9UPQ9.3|TNC6B_HUMAN RecName: Full= (1723) 3841 635.9 3e-179 gi|119580777|gb|EAW60373.1| trinucleotide repeat c (1759) 3841 635.9 3e-179 gi|194377566|dbj|BAG57731.1| unnamed protein produ (1833) 3841 635.9 3.1e-179 gi|168269678|dbj|BAG09966.1| trinucleotide repeat- (1722) 3832 634.4 8.2e-179 gi|119893240|ref|XP_001252396.1| PREDICTED: simila (1032) 3820 632.3 2.1e-178 gi|119893244|ref|XP_606579.3| PREDICTED: similar t (1726) 3820 632.5 3.2e-178 gi|109094289|ref|XP_001101019.1| PREDICTED: trinuc (1028) 3806 630.0 1e-177 gi|109094291|ref|XP_001101111.1| PREDICTED: trinuc (1722) 3806 630.2 1.5e-177 gi|149065870|gb|EDM15743.1| androgen receptor-rela (1005) 3653 605.1 3.1e-170 gi|198041672|ref|NP_620200.2| trinucleotide repeat (1818) 3653 605.3 4.9e-170 gi|118082683|ref|XP_416246.2| PREDICTED: similar t (1768) 3622 600.3 1.6e-168 gi|38197636|gb|AAH61751.1| Tnrc6b protein [Rattus ( 432) 2993 497.6 3.2e-138 gi|194385232|dbj|BAG64993.1| unnamed protein produ ( 762) 2986 496.6 1.1e-137 gi|168985141|emb|CAQ08931.1| trinucleotide repeat (1390) 2986 496.9 1.7e-137 gi|220675434|emb|CAX14039.1| trinucleotide repeat ( 744) 2687 448.0 4.5e-123 gi|93099916|gb|AAI15730.1| Tnrc6b protein [Mus mus ( 740) 2595 433.1 1.4e-118 gi|73969034|ref|XP_859411.1| PREDICTED: similar to (1720) 2411 403.5 2.7e-109 gi|51873840|gb|AAH80750.1| Tnrc6b protein [Mus mus ( 312) 2139 358.7 1.5e-96 gi|9295520|gb|AAF86977.1|AF275151_1 androgen recep ( 249) 1717 290.0 5.6e-76 gi|189525964|ref|XP_700198.3| PREDICTED: similar t (2020) 1727 292.4 8.9e-76 gi|17028428|gb|AAH17531.1| Tnrc6b protein [Mus mus ( 249) 1706 288.2 1.9e-75 gi|118097958|ref|XP_414871.2| PREDICTED: similar t (1906) 1537 261.5 1.7e-66 gi|149409007|ref|XP_001505551.1| PREDICTED: simila (1935) 1528 260.0 4.7e-66 gi|73958644|ref|XP_860762.1| PREDICTED: similar to ( 642) 1513 257.2 1.1e-65 gi|126335241|ref|XP_001369211.1| PREDICTED: simila (1910) 1518 258.4 1.4e-65 gi|109127953|ref|XP_001098013.1| PREDICTED: simila (1709) 1517 258.2 1.5e-65 gi|109127951|ref|XP_001098210.1| PREDICTED: simila (1937) 1517 258.2 1.6e-65 gi|73958648|ref|XP_860826.1| PREDICTED: similar to (1101) 1513 257.4 1.7e-65 gi|149067987|gb|EDM17539.1| trinucleotide repeat c (1937) 1515 257.9 2e-65 gi|52545832|emb|CAH56236.1| hypothetical protein [ (1053) 1510 256.9 2.3e-65 gi|73958650|ref|XP_547086.2| PREDICTED: similar to (1708) 1513 257.5 2.3e-65 gi|119576187|gb|EAW55783.1| trinucleotide repeat c (1601) 1510 257.0 3.1e-65 gi|21307718|gb|AAK62026.1| GW182 autoantigen [Homo (1709) 1510 257.0 3.3e-65 gi|119576188|gb|EAW55784.1| trinucleotide repeat c (1935) 1510 257.1 3.6e-65 gi|116805348|ref|NP_055309.2| trinucleotide repeat (1962) 1510 257.1 3.6e-65 gi|62287897|sp|Q8NDV7.1|TNR6A_HUMAN RecName: Full= (1962) 1510 257.1 3.6e-65 gi|26336695|dbj|BAC32030.1| unnamed protein produc ( 627) 1495 254.3 8.2e-65 gi|224070154|ref|XP_002196372.1| PREDICTED: trinuc (1926) 1502 255.8 8.8e-65 >>gi|74183955|dbj|BAE37027.1| unnamed protein product [M (731 aa) initn: 3942 init1: 3942 opt: 3942 Z-score: 3468.3 bits: 652.0 E(): 1.8e-184 Smith-Waterman score: 3942; 99.825% identity (99.825% similar) in 571 aa overlap (1-571:161-731) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL :::::::::::::::::::::::::::::: gi|741 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQLL 140 150 160 170 180 190 40 50 60 70 80 90 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP 200 210 220 230 240 250 100 110 120 130 140 150 mKIAA1 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ 260 270 280 290 300 310 160 170 180 190 200 210 mKIAA1 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS 320 330 340 350 360 370 220 230 240 250 260 270 mKIAA1 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS 380 390 400 410 420 430 280 290 300 310 320 330 mKIAA1 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS 440 450 460 470 480 490 340 350 360 370 380 390 mKIAA1 RNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RNTTPLTRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL 500 510 520 530 540 550 400 410 420 430 440 450 mKIAA1 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT 560 570 580 590 600 610 460 470 480 490 500 510 mKIAA1 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL 620 630 640 650 660 670 520 530 540 550 560 570 mKIAA1 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS 680 690 700 710 720 730 mKIAA1 I : gi|741 I >>gi|26342470|dbj|BAC34897.1| unnamed protein product [M (812 aa) initn: 3942 init1: 3942 opt: 3942 Z-score: 3467.7 bits: 652.0 E(): 1.9e-184 Smith-Waterman score: 3942; 99.825% identity (99.825% similar) in 571 aa overlap (1-571:242-812) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL :::::::::::::::::::::::::::::: gi|263 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQLL 220 230 240 250 260 270 40 50 60 70 80 90 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP 280 290 300 310 320 330 100 110 120 130 140 150 mKIAA1 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ 340 350 360 370 380 390 160 170 180 190 200 210 mKIAA1 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS 400 410 420 430 440 450 220 230 240 250 260 270 mKIAA1 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS 460 470 480 490 500 510 280 290 300 310 320 330 mKIAA1 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS 520 530 540 550 560 570 340 350 360 370 380 390 mKIAA1 RNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RNTTPLTRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL 580 590 600 610 620 630 400 410 420 430 440 450 mKIAA1 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT 640 650 660 670 680 690 460 470 480 490 500 510 mKIAA1 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL 700 710 720 730 740 750 520 530 540 550 560 570 mKIAA1 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS 760 770 780 790 800 810 mKIAA1 I : gi|263 I >>gi|159110982|ref|NP_796098.3| trinucleotide repeat con (1774 aa) initn: 3942 init1: 3942 opt: 3942 Z-score: 3463.1 bits: 652.3 E(): 3.5e-184 Smith-Waterman score: 3942; 99.825% identity (99.825% similar) in 571 aa overlap (1-571:1204-1774) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL :::::::::::::::::::::::::::::: gi|159 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQLL 1180 1190 1200 1210 1220 1230 40 50 60 70 80 90 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP 1240 1250 1260 1270 1280 1290 100 110 120 130 140 150 mKIAA1 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ 1300 1310 1320 1330 1340 1350 160 170 180 190 200 210 mKIAA1 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS 1360 1370 1380 1390 1400 1410 220 230 240 250 260 270 mKIAA1 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS 1420 1430 1440 1450 1460 1470 280 290 300 310 320 330 mKIAA1 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS 1480 1490 1500 1510 1520 1530 340 350 360 370 380 390 mKIAA1 RNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 RNTTPLTRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL 1540 1550 1560 1570 1580 1590 400 410 420 430 440 450 mKIAA1 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT 1600 1610 1620 1630 1640 1650 460 470 480 490 500 510 mKIAA1 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL 1660 1670 1680 1690 1700 1710 520 530 540 550 560 570 mKIAA1 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS 1720 1730 1740 1750 1760 1770 mKIAA1 I : gi|159 I >>gi|67782332|ref|NP_659061.2| trinucleotide repeat cont (1810 aa) initn: 3942 init1: 3942 opt: 3942 Z-score: 3462.9 bits: 652.3 E(): 3.5e-184 Smith-Waterman score: 3942; 99.825% identity (99.825% similar) in 571 aa overlap (1-571:1240-1810) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL :::::::::::::::::::::::::::::: gi|677 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQLL 1210 1220 1230 1240 1250 1260 40 50 60 70 80 90 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP 1270 1280 1290 1300 1310 1320 100 110 120 130 140 150 mKIAA1 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ 1330 1340 1350 1360 1370 1380 160 170 180 190 200 210 mKIAA1 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS 1390 1400 1410 1420 1430 1440 220 230 240 250 260 270 mKIAA1 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS 1450 1460 1470 1480 1490 1500 280 290 300 310 320 330 mKIAA1 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS 1510 1520 1530 1540 1550 1560 340 350 360 370 380 390 mKIAA1 RNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 RNTTPLTRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL 1570 1580 1590 1600 1610 1620 400 410 420 430 440 450 mKIAA1 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT 1630 1640 1650 1660 1670 1680 460 470 480 490 500 510 mKIAA1 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL 1690 1700 1710 1720 1730 1740 520 530 540 550 560 570 mKIAA1 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS 1750 1760 1770 1780 1790 1800 mKIAA1 I : gi|677 I 1810 >>gi|148672646|gb|EDL04593.1| trinucleotide repeat conta (1817 aa) initn: 3942 init1: 3942 opt: 3942 Z-score: 3462.9 bits: 652.3 E(): 3.5e-184 Smith-Waterman score: 3942; 99.825% identity (99.825% similar) in 571 aa overlap (1-571:1247-1817) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL :::::::::::::::::::::::::::::: gi|148 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQLL 1220 1230 1240 1250 1260 1270 40 50 60 70 80 90 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP 1280 1290 1300 1310 1320 1330 100 110 120 130 140 150 mKIAA1 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ 1340 1350 1360 1370 1380 1390 160 170 180 190 200 210 mKIAA1 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS 1400 1410 1420 1430 1440 1450 220 230 240 250 260 270 mKIAA1 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS 1460 1470 1480 1490 1500 1510 280 290 300 310 320 330 mKIAA1 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS 1520 1530 1540 1550 1560 1570 340 350 360 370 380 390 mKIAA1 RNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RNTTPLTRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL 1580 1590 1600 1610 1620 1630 400 410 420 430 440 450 mKIAA1 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT 1640 1650 1660 1670 1680 1690 460 470 480 490 500 510 mKIAA1 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL 1700 1710 1720 1730 1740 1750 520 530 540 550 560 570 mKIAA1 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS 1760 1770 1780 1790 1800 1810 mKIAA1 I : gi|148 I >>gi|74184073|dbj|BAE37059.1| unnamed protein product [M (838 aa) initn: 3656 init1: 3656 opt: 3930 Z-score: 3456.9 bits: 650.1 E(): 7.6e-184 Smith-Waterman score: 3930; 99.650% identity (99.650% similar) in 572 aa overlap (1-571:267-838) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL :::::::::::::::::::::::::::::: gi|741 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQLL 240 250 260 270 280 290 40 50 60 70 80 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQ-RQPSMKHSPSHPVGPKPHLDNMV :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|741 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMV 300 310 320 330 340 350 90 100 110 120 130 140 mKIAA1 PNALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PNALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVAT 360 370 380 390 400 410 150 160 170 180 190 200 mKIAA1 QEATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QEATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKS 420 430 440 450 460 470 210 220 230 240 250 260 mKIAA1 SNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNS 480 490 500 510 520 530 270 280 290 300 310 320 mKIAA1 SLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHIS 540 550 560 570 580 590 330 340 350 360 370 380 mKIAA1 SRNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLV ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SRNTTPLTRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLV 600 610 620 630 640 650 390 400 410 420 430 440 mKIAA1 LHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNT 660 670 680 690 700 710 450 460 470 480 490 500 mKIAA1 TILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTG 720 730 740 750 760 770 510 520 530 540 550 560 mKIAA1 LGQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LGQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSD 780 790 800 810 820 830 570 mKIAA1 SI :: gi|741 SI >>gi|194226868|ref|XP_001500122.2| PREDICTED: trinucleot (1714 aa) initn: 3759 init1: 3759 opt: 3872 Z-score: 3401.8 bits: 640.9 E(): 9e-181 Smith-Waterman score: 3872; 97.548% identity (99.650% similar) in 571 aa overlap (1-571:1145-1714) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL ::::::::::::::::::::::::::: :: gi|194 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQ-LL 1120 1130 1140 1150 1160 1170 40 50 60 70 80 90 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QNQRKLSQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP 1180 1190 1200 1210 1220 1230 100 110 120 130 140 150 mKIAA1 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ 1240 1250 1260 1270 1280 1290 160 170 180 190 200 210 mKIAA1 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EANMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS 1300 1310 1320 1330 1340 1350 220 230 240 250 260 270 mKIAA1 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|194 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSS 1360 1370 1380 1390 1400 1410 280 290 300 310 320 330 mKIAA1 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS 1420 1430 1440 1450 1460 1470 340 350 360 370 380 390 mKIAA1 RNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL ::::::::::::::::::.::::::::::::::::::::.:::::::::::::::::::: gi|194 RNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSYWLVL 1480 1490 1500 1510 1520 1530 400 410 420 430 440 450 mKIAA1 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT 1540 1550 1560 1570 1580 1590 460 470 480 490 500 510 mKIAA1 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL :::::::.:::::::::::::::::::::::.:::::::.:.:.:::::::::::::::: gi|194 ILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQTQSDPVGPALNLFGGSTGL 1600 1610 1620 1630 1640 1650 520 530 540 550 560 570 mKIAA1 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS :::::::::::::::::.::::::::::::::.::::::::::::::::::::::::::: gi|194 GQWSSSAGGSSGADLAGASLWGPPNYSSSLWGIPTVEDPHRMGSPAPLLPGDLLGGGSDS 1660 1670 1680 1690 1700 1710 mKIAA1 I : gi|194 I >>gi|73969032|ref|XP_859375.1| PREDICTED: similar to tri (997 aa) initn: 3716 init1: 3716 opt: 3843 Z-score: 3379.5 bits: 636.0 E(): 1.6e-179 Smith-Waterman score: 3843; 97.028% identity (99.476% similar) in 572 aa overlap (1-571:427-997) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL ::::::::::::::::::::::::::: :: gi|739 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQ-LL 400 410 420 430 440 450 40 50 60 70 80 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQ-RQPSMKHSPSHPVGPKPHLDNMV :::::.:::::::::::::::::::::::::::::: :::.::::::::::::::::::: gi|739 QNQRKLSQAVRQQQEQQLARMVSALQQQQQQQQQQQQRQPGMKHSPSHPVGPKPHLDNMV 460 470 480 490 500 510 90 100 110 120 130 140 mKIAA1 PNALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVAT ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVAT 520 530 540 550 560 570 150 160 170 180 190 200 mKIAA1 QEATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKS :::.::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|739 QEANMHKNGAIVAPGKTRGGSPYNQFDIIPSDTLGGHTGPAGDSWLPAKSPPTNKIGSKS 580 590 600 610 620 630 210 220 230 240 250 260 mKIAA1 SNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNS ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|739 SNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNS 640 650 660 670 680 690 270 280 290 300 310 320 mKIAA1 SLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHIS 700 710 720 730 740 750 330 340 350 360 370 380 mKIAA1 SRNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLV :::::::::::::::::::.::::::::::::::::::::.::::::::::::::::::: gi|739 SRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSYWLV 760 770 780 790 800 810 390 400 410 420 430 440 mKIAA1 LHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNT 820 830 840 850 860 870 450 460 470 480 490 500 mKIAA1 TILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTG ::::::::.:::::::::::::::::::::::.:::::::.:.:.::::::::::::::: gi|739 TILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQTQSDPVGPALNLFGGSTG 880 890 900 910 920 930 510 520 530 540 550 560 mKIAA1 LGQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSD ::::::::::::::::::.::::::::::::::::.:::::::::::::::::::::::: gi|739 LGQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPAVEDPHRMGSPAPLLPGDLLGGGSD 940 950 960 970 980 990 570 mKIAA1 SI :: gi|739 SI >>gi|20306948|gb|AAH28626.1| TNRC6B protein [Homo sapien (1029 aa) initn: 3564 init1: 3564 opt: 3841 Z-score: 3377.6 bits: 635.7 E(): 2e-179 Smith-Waterman score: 3841; 97.373% identity (99.124% similar) in 571 aa overlap (1-571:463-1029) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL ::::::::::::::::::::::::::: :: gi|203 VSASMLKQFPNSGLSPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQ-LL 440 450 460 470 480 490 40 50 60 70 80 90 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPSHPVGPKPHLDNMVP ::::::::::::::::::::::::::::::::: :::.:::::::::::::::::::: gi|203 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQ---RQPGMKHSPSHPVGPKPHLDNMVP 500 510 520 530 540 100 110 120 130 140 150 mKIAA1 NALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 NALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQ 550 560 570 580 590 600 160 170 180 190 200 210 mKIAA1 EATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 EANMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKSS 610 620 630 640 650 660 220 230 240 250 260 270 mKIAA1 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNSS :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|203 NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSS 670 680 690 700 710 720 280 290 300 310 320 330 mKIAA1 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 LNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISS 730 740 750 760 770 780 340 350 360 370 380 390 mKIAA1 RNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLVL ::::::::::::::::::.::::::::::::::::::::.:::::::::::::::::::: gi|203 RNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSYWLVL 790 800 810 820 830 840 400 410 420 430 440 450 mKIAA1 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|203 HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT 850 860 870 880 890 900 460 470 480 490 500 510 mKIAA1 ILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTGL :::::::.:::::::::::::::::::::::.:::::::.:::.:::::::::::::::: gi|203 ILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQNQSDPVGPALNLFGGSTGL 910 920 930 940 950 960 520 530 540 550 560 570 mKIAA1 GQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|203 GQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDS 970 980 990 1000 1010 1020 mKIAA1 I : gi|203 I >>gi|73969030|ref|XP_859340.1| PREDICTED: similar to Tri (1726 aa) initn: 3716 init1: 3716 opt: 3843 Z-score: 3376.3 bits: 636.2 E(): 2.4e-179 Smith-Waterman score: 3843; 97.028% identity (99.476% similar) in 572 aa overlap (1-571:1156-1726) 10 20 30 mKIAA1 AMLSQLPQIPQFQLACQLLLQQQQQQQQLL ::::::::::::::::::::::::::: :: gi|739 VSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQ-LL 1130 1140 1150 1160 1170 1180 40 50 60 70 80 mKIAA1 QNQRKISQAVRQQQEQQLARMVSALQQQQQQQQQQQ-RQPSMKHSPSHPVGPKPHLDNMV :::::.:::::::::::::::::::::::::::::: :::.::::::::::::::::::: gi|739 QNQRKLSQAVRQQQEQQLARMVSALQQQQQQQQQQQQRQPGMKHSPSHPVGPKPHLDNMV 1190 1200 1210 1220 1230 1240 90 100 110 120 130 140 mKIAA1 PNALNVGLPDLPTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVAT ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVAT 1250 1260 1270 1280 1290 1300 150 160 170 180 190 200 mKIAA1 QEATMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKSPPTNKIGSKS :::.::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|739 QEANMHKNGAIVAPGKTRGGSPYNQFDIIPSDTLGGHTGPAGDSWLPAKSPPTNKIGSKS 1310 1320 1330 1340 1350 1360 210 220 230 240 250 260 mKIAA1 SNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTTTSPIVDTDHQLLRDNTTGSNS ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|739 SNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNS 1370 1380 1390 1400 1410 1420 270 280 290 300 310 320 mKIAA1 SLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHIS 1430 1440 1450 1460 1470 1480 330 340 350 360 370 380 mKIAA1 SRNTTPLPRPPPGLTNPKPASPWSSTAPRSVRGWGTQDSRIASASTWSDGGSVRPSYWLV :::::::::::::::::::.::::::::::::::::::::.::::::::::::::::::: gi|739 SRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSYWLV 1490 1500 1510 1520 1530 1540 390 400 410 420 430 440 mKIAA1 LHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNT 1550 1560 1570 1580 1590 1600 450 460 470 480 490 500 mKIAA1 TILAEFATEDEVSRFLAQAQPPTPAATPSAPATGWQSLETSQNQADPVGPALNLFGGSTG ::::::::.:::::::::::::::::::::::.:::::::.:.:.::::::::::::::: gi|739 TILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQTQSDPVGPALNLFGGSTG 1610 1620 1630 1640 1650 1660 510 520 530 540 550 560 mKIAA1 LGQWSSSAGGSSGADLAGTSLWGPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSD ::::::::::::::::::.::::::::::::::::.:::::::::::::::::::::::: gi|739 LGQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPAVEDPHRMGSPAPLLPGDLLGGGSD 1670 1680 1690 1700 1710 1720 570 mKIAA1 SI :: gi|739 SI 571 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 15:58:49 2009 done: Thu Mar 12 16:06:10 2009 Total Scan time: 983.170 Total Display time: 0.270 Function used was FASTA [version 34.26.5 April 26, 2007]