# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbe05021.fasta.nr -Q ../query/mFLJ00386.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mFLJ00386, 769 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7877964 sequences
Expectation_n fit: rho(ln(x))= 7.9124+/-0.000235; mu= 2.1574+/- 0.013
mean_var=268.8642+/-51.018, 0's: 34 Z-trim: 220 B-trim: 0 in 0/65
Lambda= 0.078218
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 38, opt: 26, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|47847528|dbj|BAD21436.1| mFLJ00386 protein [Mus ( 769) 5269 608.4 3.3e-171
gi|100817039|ref|NP_001035773.1| mediator complex ( 749) 5123 591.9 3e-166
gi|32451779|gb|AAH54779.1| Mediator complex subuni ( 749) 5106 590.0 1.1e-165
gi|73995885|ref|XP_849892.1| PREDICTED: similar to ( 749) 4718 546.2 1.7e-152
gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine ( 746) 4625 535.7 2.5e-149
gi|15559260|gb|AAH13985.1| Mediator complex subuni ( 748) 4621 535.3 3.4e-149
gi|194213957|ref|XP_001488170.2| PREDICTED: simila ( 748) 4574 530.0 1.3e-147
gi|45708378|gb|AAH03078.1| MED15 protein [Homo sap ( 767) 4495 521.1 6.5e-145
gi|29612457|gb|AAH49891.1| Med15 protein [Mus musc ( 651) 4491 520.5 8e-145
gi|119623358|gb|EAX02953.1| PC2 (positive cofactor ( 722) 4456 516.6 1.3e-143
gi|221040200|dbj|BAH11863.1| unnamed protein produ ( 722) 4450 516.0 2.1e-143
gi|194043420|ref|XP_001927322.1| PREDICTED: simila ( 747) 3847 447.9 6.6e-123
gi|194377598|dbj|BAG57747.1| unnamed protein produ ( 718) 3712 432.7 2.5e-118
gi|119623353|gb|EAX02948.1| PC2 (positive cofactor ( 677) 3668 427.7 7.5e-117
gi|47678605|emb|CAG30423.1| PCQAP [Homo sapiens] ( 674) 3659 426.7 1.5e-116
gi|55730907|emb|CAH92172.1| hypothetical protein [ ( 566) 3393 396.5 1.5e-107
gi|3037135|gb|AAC12944.1| TPA inducible protein [H ( 579) 3204 375.2 3.9e-101
gi|119623355|gb|EAX02950.1| PC2 (positive cofactor ( 667) 3128 366.7 1.6e-98
gi|148743887|gb|AAI42513.1| MED15 protein [Bos tau ( 711) 2991 351.3 7.6e-94
gi|149019754|gb|EDL77902.1| positive cofactor 2, m ( 790) 2925 343.9 1.4e-91
gi|119623354|gb|EAX02949.1| PC2 (positive cofactor ( 456) 2903 341.1 5.7e-91
gi|148665060|gb|EDK97476.1| positive cofactor 2, m ( 789) 2906 341.8 6.3e-91
gi|109093354|ref|XP_001084461.1| PREDICTED: simila ( 858) 2850 335.5 5.3e-89
gi|74151422|dbj|BAE38826.1| unnamed protein produc ( 639) 2844 334.7 7e-89
gi|27734440|sp|Q96RN5.2|MED15_HUMAN RecName: Full= ( 788) 2829 333.1 2.6e-88
gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo ( 811) 2828 333.0 2.9e-88
gi|114685221|ref|XP_525528.2| PREDICTED: similar t ( 947) 2827 333.0 3.4e-88
gi|74199527|dbj|BAE41448.1| unnamed protein produc ( 766) 2735 322.5 4e-85
gi|14276859|gb|AAK58424.1|AF328770_1 PC2-glutamine ( 667) 2700 318.4 5.6e-84
gi|20177999|sp|Q924H2.2|MED15_MOUSE RecName: Full= ( 792) 2700 318.5 6.3e-84
gi|118098691|ref|XP_415235.2| PREDICTED: similar t ( 821) 2689 317.3 1.5e-83
gi|21956190|gb|AAM83255.1|AF378334_1 ARC105 [Xenop ( 754) 2641 311.8 6.1e-82
gi|82185335|sp|Q6NS15.1|MED15_XENLA RecName: Full= ( 777) 2639 311.6 7.3e-82
gi|126325142|ref|XP_001376424.1| PREDICTED: simila ( 805) 2626 310.2 2.1e-81
gi|166203452|gb|ABY84679.1| mediator complex subun ( 792) 2623 309.8 2.6e-81
gi|166203454|gb|ABY84680.1| mediator complex subun ( 794) 2592 306.3 2.9e-80
gi|28374176|gb|AAH46263.1| LOC398566 protein [Xeno ( 846) 2541 300.6 1.6e-78
gi|193784960|dbj|BAG54113.1| unnamed protein produ ( 404) 2429 287.6 6.6e-75
gi|193784871|dbj|BAG54024.1| unnamed protein produ ( 404) 2426 287.2 8.4e-75
gi|50949442|emb|CAH10580.1| hypothetical protein [ ( 404) 2420 286.6 1.3e-74
gi|14043091|gb|AAH07529.1| MED15 protein [Homo sap ( 384) 2416 286.1 1.8e-74
gi|182890882|gb|AAI65669.1| Med15 protein [Danio r ( 809) 2376 282.0 6.4e-73
gi|82188674|sp|Q7ZVN7.1|MED15_DANRE RecName: Full= ( 809) 2369 281.2 1.1e-72
gi|117938842|gb|AAH03221.1| Med15 protein [Mus mus ( 310) 2086 248.7 2.5e-63
gi|2565065|gb|AAB91443.1| CTG7a [Homo sapiens] ( 349) 2016 240.9 6.5e-61
gi|223648474|gb|ACN10995.1| Mediator of RNA polyme ( 356) 2010 240.2 1.1e-60
gi|149522810|ref|XP_001519670.1| PREDICTED: simila ( 319) 1980 236.8 1e-59
gi|50949499|emb|CAH10623.1| hypothetical protein [ ( 277) 1834 220.2 8.6e-55
gi|119623360|gb|EAX02955.1| PC2 (positive cofactor ( 247) 1499 182.4 1.9e-43
gi|190660045|gb|EDV57237.1| GG24724 [Drosophila er ( 750) 1141 142.6 5.5e-31
>>gi|47847528|dbj|BAD21436.1| mFLJ00386 protein [Mus mus (769 aa)
initn: 5269 init1: 5269 opt: 5269 Z-score: 3230.0 bits: 608.4 E(): 3.3e-171
Smith-Waterman score: 5269; 100.000% identity (100.000% similar) in 769 aa overlap (1-769:1-769)
10 20 30 40 50 60
mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
10 20 30 40 50 60
70 80 90 100 110 120
mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
70 80 90 100 110 120
130 140 150 160 170 180
mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
130 140 150 160 170 180
190 200 210 220 230 240
mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ
190 200 210 220 230 240
250 260 270 280 290 300
mFLJ00 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS
250 260 270 280 290 300
310 320 330 340 350 360
mFLJ00 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ
310 320 330 340 350 360
370 380 390 400 410 420
mFLJ00 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP
370 380 390 400 410 420
430 440 450 460 470 480
mFLJ00 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ
430 440 450 460 470 480
490 500 510 520 530 540
mFLJ00 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR
490 500 510 520 530 540
550 560 570 580 590 600
mFLJ00 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ
550 560 570 580 590 600
610 620 630 640 650 660
mFLJ00 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ
610 620 630 640 650 660
670 680 690 700 710 720
mFLJ00 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR
670 680 690 700 710 720
730 740 750 760
mFLJ00 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
730 740 750 760
>>gi|100817039|ref|NP_001035773.1| mediator complex subu (749 aa)
initn: 5123 init1: 5123 opt: 5123 Z-score: 3141.1 bits: 591.9 E(): 3e-166
Smith-Waterman score: 5123; 100.000% identity (100.000% similar) in 749 aa overlap (21-769:1-749)
10 20 30 40 50 60
mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
::::::::::::::::::::::::::::::::::::::::
gi|100 MDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
10 20 30 40
70 80 90 100 110 120
mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
50 60 70 80 90 100
130 140 150 160 170 180
mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
110 120 130 140 150 160
190 200 210 220 230 240
mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ
170 180 190 200 210 220
250 260 270 280 290 300
mFLJ00 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS
230 240 250 260 270 280
310 320 330 340 350 360
mFLJ00 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ
290 300 310 320 330 340
370 380 390 400 410 420
mFLJ00 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP
350 360 370 380 390 400
430 440 450 460 470 480
mFLJ00 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ
410 420 430 440 450 460
490 500 510 520 530 540
mFLJ00 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR
470 480 490 500 510 520
550 560 570 580 590 600
mFLJ00 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ
530 540 550 560 570 580
610 620 630 640 650 660
mFLJ00 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ
590 600 610 620 630 640
670 680 690 700 710 720
mFLJ00 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR
650 660 670 680 690 700
730 740 750 760
mFLJ00 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|100 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
710 720 730 740
>>gi|32451779|gb|AAH54779.1| Mediator complex subunit 15 (749 aa)
initn: 5106 init1: 5106 opt: 5106 Z-score: 3130.7 bits: 590.0 E(): 1.1e-165
Smith-Waterman score: 5106; 99.733% identity (99.866% similar) in 749 aa overlap (21-769:1-749)
10 20 30 40 50 60
mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
::::::::::::::::::::::::::::::::::::::::
gi|324 MDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
10 20 30 40
70 80 90 100 110 120
mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
50 60 70 80 90 100
130 140 150 160 170 180
mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
110 120 130 140 150 160
190 200 210 220 230 240
mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
gi|324 QQQQQQQQQQQFQQQQAALQQHQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ
170 180 190 200 210 220
250 260 270 280 290 300
mFLJ00 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS
230 240 250 260 270 280
310 320 330 340 350 360
mFLJ00 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
gi|324 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPSQSQSQPLVSQAQALPGPMLYAAQ
290 300 310 320 330 340
370 380 390 400 410 420
mFLJ00 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP
350 360 370 380 390 400
430 440 450 460 470 480
mFLJ00 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ
410 420 430 440 450 460
490 500 510 520 530 540
mFLJ00 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR
470 480 490 500 510 520
550 560 570 580 590 600
mFLJ00 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ
530 540 550 560 570 580
610 620 630 640 650 660
mFLJ00 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ
590 600 610 620 630 640
670 680 690 700 710 720
mFLJ00 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR
650 660 670 680 690 700
730 740 750 760
mFLJ00 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
710 720 730 740
>>gi|73995885|ref|XP_849892.1| PREDICTED: similar to pos (749 aa)
initn: 3502 init1: 3502 opt: 4718 Z-score: 2894.1 bits: 546.2 E(): 1.7e-152
Smith-Waterman score: 4718; 92.328% identity (95.635% similar) in 756 aa overlap (21-769:1-749)
10 20 30 40 50 60
mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
::::::::::::.:::::::::::::::::::::::::::
gi|739 MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKD
10 20 30 40
70 80 90 100 110 120
mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::. ::::::
gi|739 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIG
50 60 70 80 90 100
130 140 150 160 170 180
mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
:: ::::::::::::::.::::.::::::::::::::::::::::::.::::::::::::
gi|739 MPSRGPGQSLGGMGGLGTMGQPMPLSGQPPPGTSGMAPHGMAVVSTAAPQTQLQLQQVAL
110 120 130 140 150 160
190 200 210 220 230
mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL---QQ
:::: :::::::.::::::::::::::::::::::::::::::::::::: ::
gi|739 QQQQ-----QQFQQQQVALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQQLQQQQ
170 180 190 200 210
240 250 260 270 280 290
mFLJ00 QQQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQ
:::::::::::::.::: : :::::::::::::::::::::: :::::::.::: :::::
gi|739 QQQQQHLIKLHHQNQQQIQQQQQQLQRMAQLQLQQQQQQQQQ-ALQAQPPLQQPPMQQPQ
220 230 240 250 260 270
300 310 320 330 340 350
mFLJ00 PPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPML
:::::::::::. .::::::::::: :: :.::::: :.:::::.::::::: :::: ::
gi|739 PPPSQALPQQLQPMHHPQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAPALPGQML
280 290 300 310 320 330
360 370 380 390 400 410
mFLJ00 YAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTM
:: : :::.::::::::: ::::::: ::::::::::: .::..:.:. ::::::.::::
gi|739 YA-QPQLKLVRAPMVVQQQQVQPQVQPVQPQVQPQAAVPTAQASQIVGSGVQVSQNSLTM
340 350 360 370 380 390
420 430 440 450 460 470
mFLJ00 LSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQPSQSP
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
gi|739 LSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSP
400 410 420 430 440 450
480 490 500 510 520 530
mFLJ00 VTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 VTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINK
460 470 480 490 500 510
540 550 560 570 580 590
mFLJ00 IDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
gi|739 IDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPT
520 530 540 550 560 570
600 610 620 630 640 650
mFLJ00 KQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQ
::: :::::::::::::::::::::::::::::: :::::::..::::.::::::.::::
gi|739 KQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRFEDDERQ
580 590 600 610 620 630
660 670 680 690 700 710
mFLJ00 SIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 SIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQ
640 650 660 670 680 690
720 730 740 750 760
mFLJ00 SPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 SPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
700 710 720 730 740
>>gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-ric (746 aa)
initn: 2669 init1: 2669 opt: 4625 Z-score: 2837.4 bits: 535.7 E(): 2.5e-149
Smith-Waterman score: 4625; 91.041% identity (94.466% similar) in 759 aa overlap (21-769:1-746)
10 20 30 40 50 60
mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
::::::::::::.:::::::::::::::::::::::::::
gi|142 MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKD
10 20 30 40
70 80 90 100 110 120
mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::. ::::::
gi|142 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIG
50 60 70 80 90 100
130 140 150 160 170 180
mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
::::::::::::::.:::::::. :::::::::::::::.::::::::::::::::::::
gi|142 MPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVAL
110 120 130 140 150 160
190 200 210 220 230
mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL--QQQ
:::::::: : :::::::::::::::: :::::::.:::::::::::::: :::
gi|142 QQQQQQQQFQ--QQQQAALQQQQQQQQQ----QQFQAQQSAMQQQFQAVVQQQQQLQQQQ
170 180 190 200 210
240 250 260 270 280 290
mFLJ00 QQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQ----ALQAQPPMQQPSMQ
::::::::::::.::: : :::::::.::::::::::::::: :::::::.::: ::
gi|142 QQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQALQAQPPIQQPPMQ
220 230 240 250 260 270
300 310 320 330 340 350
mFLJ00 QPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPG
::::::::::::::.:.:: :::::::: :: :.::::: :.:::::.::::::::::::
gi|142 QPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPG
280 290 300 310 320 330
360 370 380 390 400 410
mFLJ00 PMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSS
:::. : ::::::::::::: :::::: : :.:::.::.::::::::::::::
gi|142 QMLYT-QPPLKFVRAPMVVQQPPVQPQVQ------QQQTAVQTAQAAQMVAPGVQVSQSS
340 350 360 370 380
420 430 440 450 460 470
mFLJ00 LTMLSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQPS
: :::::::::::::::::::::::::::: :::::::::::::::::::::::::::
gi|142 LPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPS
390 400 410 420 430 440
480 490 500 510 520 530
mFLJ00 QSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|142 QSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRM
450 460 470 480 490 500
540 550 560 570 580 590
mFLJ00 INKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|142 INKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPV
510 520 530 540 550 560
600 610 620 630 640 650
mFLJ00 LPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEED
::::: :::::::::::::::::::::::::::::: :::::::..::::.::::.:.:
gi|142 PPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLEDD
570 580 590 600 610 620
660 670 680 690 700 710
mFLJ00 ERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADY
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|142 ERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADY
630 640 650 660 670 680
720 730 740 750 760
mFLJ00 PAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
:::::.::::::::::::::::::::::::::::::::::::::::::::.::::::::
gi|142 PAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA
690 700 710 720 730 740
>>gi|15559260|gb|AAH13985.1| Mediator complex subunit 15 (748 aa)
initn: 2582 init1: 2582 opt: 4621 Z-score: 2834.9 bits: 535.3 E(): 3.4e-149
Smith-Waterman score: 4621; 90.802% identity (94.218% similar) in 761 aa overlap (21-769:1-748)
10 20 30 40 50 60
mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
::::::::::::.:::::::::::::::::::::::::::
gi|155 MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKD
10 20 30 40
70 80 90 100 110 120
mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::. ::::::
gi|155 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIG
50 60 70 80 90 100
130 140 150 160 170 180
mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
::::::::::::::.:::::::. :::::::::::::::.::::::::::::::::::::
gi|155 MPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVAL
110 120 130 140 150 160
190 200 210 220 230
mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL--QQQ
:::::::: : :::::::::::::::: :::::::.:::::::::::::: :::
gi|155 QQQQQQQQFQ--QQQQAALQQQQQQQQQ----QQFQAQQSAMQQQFQAVVQQQQQLQQQQ
170 180 190 200 210
240 250 260 270 280 290
mFLJ00 QQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQ------ALQAQPPMQQPS
::::::::::::.::: : :::::::.::::::::::::::: :::::::.:::
gi|155 QQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPP
220 230 240 250 260 270
300 310 320 330 340 350
mFLJ00 MQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQAL
::::::::::::::::.:.:: :::::::: :: :.::::: :.:::::.::::::::::
gi|155 MQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQAL
280 290 300 310 320 330
360 370 380 390 400 410
mFLJ00 PGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQ
:: :::. : ::::::::::::: :::::: : :.:::.::.::::::::::::
gi|155 PGQMLYT-QPPLKFVRAPMVVQQPPVQPQVQ------QQQTAVQTAQAAQMVAPGVQVSQ
340 350 360 370 380
420 430 440 450 460
mFLJ00 SSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQ
::: :::::::::::::::::::::::::::: :::::::::::::::::::::::::
gi|155 SSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQ
390 400 410 420 430 440
470 480 490 500 510 520
mFLJ00 PSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|155 PSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLR
450 460 470 480 490 500
530 540 550 560 570 580
mFLJ00 RMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|155 RMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPP
510 520 530 540 550 560
590 600 610 620 630 640
mFLJ00 PVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFE
:: ::::: :::::::::::::::::::::::::::::: :::::::..::::.::::.:
gi|155 PVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLE
570 580 590 600 610 620
650 660 670 680 690 700
mFLJ00 EDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPA
.:::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|155 DDERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPA
630 640 650 660 670 680
710 720 730 740 750 760
mFLJ00 DYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSA
:::::::.::::::::::::::::::::::::::::::::::::::::::::.:::::::
gi|155 DYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSA
690 700 710 720 730 740
mFLJ00 A
:
gi|155 A
>>gi|194213957|ref|XP_001488170.2| PREDICTED: similar to (748 aa)
initn: 2498 init1: 2498 opt: 4574 Z-score: 2806.3 bits: 530.0 E(): 1.3e-147
Smith-Waterman score: 4633; 90.407% identity (94.218% similar) in 761 aa overlap (21-769:1-748)
10 20 30 40 50 60
mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
:::.::::::::::::::::::::::::::::::::::::
gi|194 MDVTGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD
10 20 30 40
70 80 90 100 110 120
mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG
::::::::::::::::::::::::::::::::::::::::::::::::::::. ::::::
gi|194 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPATGAAGIG
50 60 70 80 90 100
130 140 150 160 170 180
mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL
:: :::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
gi|194 MPSRGPGQSLGGMGGLGAMGQPMPLSGQPPPGTSGMAPHGMAVVSTTTPQTQLQLQQVAL
110 120 130 140 150 160
190 200 210 220 230
mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQ---Q
::: :::::::.::::::::::: :::::::::::::::::::: : :
gi|194 QQQ------QQFQQQQVALQQQQQQQQQ------FQAQQNAMQQQFQAVVQQQQQQLQQQ
170 180 190 200
240 250 260 270 280 290
mFLJ00 QQQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQ-----ALQAQPPMQQPS
:::::::::::::.::: : ::::::::::::::::::::::: :::::::.:::
gi|194 QQQQQHLIKLHHQNQQQLQQQQQQLQRMAQLQLQQQQQQQQQQQQQQQALQAQPPIQQPP
210 220 230 240 250 260
300 310 320 330 340 350
mFLJ00 MQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQAL
::::::::::::::::.:.::::::::::: :: .::::: :.:::::.::::::: :
gi|194 MQQPQPPPSQALPQQLQQMHHPQHHQPPPQPQQPTVAQNQPSQLPPQSQTQPLVSQAPPL
270 280 290 300 310 320
360 370 380 390 400 410
mFLJ00 PGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQ
:: :.:. :::::.:: ::::::::::::::::::::: :.:: .::..:.:. ::::::
gi|194 PGQMMYT-QQQLKLVRPPMVVQQPQVQPQVQQVQPQVQQQTAVPTAQASQIVGSGVQVSQ
330 340 350 360 370 380
420 430 440 450 460
mFLJ00 SSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQ
.::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
gi|194 NSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQ
390 400 410 420 430 440
470 480 490 500 510 520
mFLJ00 PSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 PSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLR
450 460 470 480 490 500
530 540 550 560 570 580
mFLJ00 RMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 RMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPP
510 520 530 540 550 560
590 600 610 620 630 640
mFLJ00 PVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFE
:: ::::: :::::::::::::::::::::::::::::: ::::::...::::.:::.::
gi|194 PVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPVTAPVVCARKRKFE
570 580 590 600 610 620
650 660 670 680 690 700
mFLJ00 EDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPA
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 EDEKQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPA
630 640 650 660 670 680
710 720 730 740 750 760
mFLJ00 DYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSA
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 DYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSA
690 700 710 720 730 740
mFLJ00 A
:
gi|194 A
>>gi|45708378|gb|AAH03078.1| MED15 protein [Homo sapiens (767 aa)
initn: 2582 init1: 2582 opt: 4495 Z-score: 2758.0 bits: 521.1 E(): 6.5e-145
Smith-Waterman score: 4495; 87.051% identity (91.154% similar) in 780 aa overlap (2-769:5-767)
10 20 30 40 50
mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKS
:::: : : ::. .: . :. : .. . ::::::::::::::
gi|457 ARGLRRRRWRPSGIRAAGAGEQAWTFPGK----RPTGGAPPSGRSCEDAMRKAGVAHSKS
10 20 30 40 50
60 70 80 90 100 110
mFLJ00 SKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::. :::
gi|457 SKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAA
60 70 80 90 100 110
120 130 140 150 160 170
mFLJ00 GIGMPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQ
:::::::::::::::::.::: :::. :::::::::::::::.:::::::::::::::::
gi|457 GIGMPPRGPGQSLGGMGSLGATGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQ
120 130 140 150 160 170
180 190 200 210 220 230
mFLJ00 VALQQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL--
::::::::::: : :::::::::::::::::: :::::.::::::::::::::
gi|457 VALQQQQQQQQFQ--QQQQAALQQQQQQQQQQQ----FQAQQSAMQQQFQAVVQQQQQLQ
180 190 200 210 220 230
240 250 260 270 280
mFLJ00 QQQQQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQ------ALQAQPPMQ
:::::::::::::::.::: : :::::::.::::::::::::::: :::::::.:
gi|457 QQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQ
240 250 260 270 280 290
290 300 310 320 330 340
mFLJ00 QPSMQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQA
:: ::::::::::::::::.:.:: :::::::: :: :.::::: :.:::::.:::::::
gi|457 QPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQA
300 310 320 330 340 350
350 360 370 380 390 400
mFLJ00 QALPGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQ
::::: :::. : ::::::::::::: ::::::: :.:::.::.:::::::::
gi|457 QALPGQMLYT-QPPLKFVRAPMVVQQPPVQPQVQQ------QQTAVQTAQAAQMVAPGVQ
360 370 380 390 400
410 420 430 440 450 460
mFLJ00 VSQSSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSP
:::::: :::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|457 VSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSP
410 420 430 440 450 460
470 480 490 500 510 520
mFLJ00 SPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|457 SPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIE
470 480 490 500 510 520
530 540 550 560 570 580
mFLJ00 PLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|457 PLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTP
530 540 550 560 570 580
590 600 610 620 630 640
mFLJ00 PPPPVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKR
::::: ::::: :::::::::::::::::::::::::::::: :::::::..::::.:::
gi|457 PPPPVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKR
590 600 610 620 630 640
650 660 670 680 690 700
mFLJ00 RFEEDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELS
:.:.:::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|457 RLEDDERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELS
650 660 670 680 690 700
710 720 730 740 750 760
mFLJ00 VPADYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQAC
::::::::::.::::::::::::::::::::::::::::::::::::::::::::.::::
gi|457 VPADYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC
710 720 730 740 750 760
mFLJ00 LSAA
::::
gi|457 LSAA
>>gi|29612457|gb|AAH49891.1| Med15 protein [Mus musculus (651 aa)
initn: 4491 init1: 4491 opt: 4491 Z-score: 2756.3 bits: 520.5 E(): 8e-145
Smith-Waterman score: 4491; 100.000% identity (100.000% similar) in 651 aa overlap (119-769:1-651)
90 100 110 120 130 140
mFLJ00 IHNKKSQASVSDPMNALQSLTGGPTPGAAGIGMPPRGPGQSLGGMGGLGAMGQPLPLSGQ
::::::::::::::::::::::::::::::
gi|296 IGMPPRGPGQSLGGMGGLGAMGQPLPLSGQ
10 20 30
150 160 170 180 190 200
mFLJ00 PPPGTSGMAPHGMAVVSTATPQTQLQLQQVALQQQQQQQQQQQFQQQQAALQQQQQQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 PPPGTSGMAPHGMAVVSTATPQTQLQLQQVALQQQQQQQQQQQFQQQQAALQQQQQQQQQ
40 50 60 70 80 90
210 220 230 240 250 260
mFLJ00 QQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQQQHLIKLHHQSQQQQIQQQQLQRMAQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 QQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQQQHLIKLHHQSQQQQIQQQQLQRMAQLQ
100 110 120 130 140 150
270 280 290 300 310 320
mFLJ00 LQQQQQQQQQQALQAQPPMQQPSMQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 LQQQQQQQQQQALQAQPPMQQPSMQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIA
160 170 180 190 200 210
330 340 350 360 370 380
mFLJ00 QNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 QNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQV
220 230 240 250 260 270
390 400 410 420 430 440
mFLJ00 QPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPGSQPNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 QPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPGSQPNS
280 290 300 310 320 330
450 460 470 480 490 500
mFLJ00 NVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 NVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQA
340 350 360 370 380 390
510 520 530 540 550 560
mFLJ00 EEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 EEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQK
400 410 420 430 440 450
570 580 590 600 610 620
mFLJ00 CEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 CEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMM
460 470 480 490 500 510
630 640 650 660 670 680
mFLJ00 AIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 AIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLI
520 530 540 550 560 570
690 700 710 720 730 740
mFLJ00 CKLDDKDLPSVPPLELSVPADYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 CKLDDKDLPSVPPLELSVPADYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKH
580 590 600 610 620 630
750 760
mFLJ00 SVTALLNTWAQSIHQACLSAA
:::::::::::::::::::::
gi|296 SVTALLNTWAQSIHQACLSAA
640 650
>>gi|119623358|gb|EAX02953.1| PC2 (positive cofactor 2, (722 aa)
initn: 2582 init1: 2582 opt: 4456 Z-score: 2734.5 bits: 516.6 E(): 1.3e-143
Smith-Waterman score: 4456; 90.612% identity (94.014% similar) in 735 aa overlap (47-769:1-722)
20 30 40 50 60 70
mFLJ00 GAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYL
::::::::::::::::::::::::::::::
gi|119 MRKAGVAHSKSSKDMESHVFLKAKTRDEYL
10 20 30
80 90 100 110 120 130
mFLJ00 SLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIGMPPRGPGQSLGGMGGL
::::::::::::::::::::::::::::::::::::. ::::::::::::::::::::.:
gi|119 SLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSL
40 50 60 70 80 90
140 150 160 170 180 190
mFLJ00 GAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVALQQQQQQQQQQQFQQQQ
::::::. :::::::::::::::.:::::::::::::::::::::::::::: : ::::
gi|119 GAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQ--QQQQ
100 110 120 130 140
200 210 220 230 240 250
mFLJ00 AALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL--QQQQQQQHLIKLHHQSQQQ
:::::::::::::: :::::.:::::::::::::: :::::::::::::::.:::
gi|119 AALQQQQQQQQQQQ----FQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQ
150 160 170 180 190 200
260 270 280 290 300
mFLJ00 -QIQQQQLQRMAQLQLQQQQQQQQQQ------ALQAQPPMQQPSMQQPQPPPSQALPQQL
: :::::::.::::::::::::::: :::::::.::: ::::::::::::::::
gi|119 IQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQL
210 220 230 240 250 260
310 320 330 340 350 360
mFLJ00 SQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQQQLKFVR
.:.:: :::::::: :: :.::::: :.:::::.:::::::::::: :::. : :::::
gi|119 QQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYT-QPPLKFVR
270 280 290 300 310 320
370 380 390 400 410 420
mFLJ00 APMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSPSPGQQVQ
:::::::: ::::::: :.:::.::.::::::::::::::: ::::::::::::
gi|119 APMVVQQPPVQPQVQQ------QQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQ
330 340 350 360 370
430 440 450 460 470 480
mFLJ00 TPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSV
:::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
gi|119 TPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSV
380 390 400 410 420 430
490 500 510 520 530 540
mFLJ00 PSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 PSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDL
440 450 460 470 480 490
550 560 570 580 590 600
mFLJ00 SKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQPLLD
:::::::::::::::::::::::::::::::::::::::::::::: ::::: :::::::
gi|119 SKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPTKQQYLCQPLLD
500 510 520 530 540 550
610 620 630 640 650 660
mFLJ00 AVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQGEVA
::::::::::::::::::::::: :::::::..::::.::::.:.:::::::.:::::::
gi|119 AVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLEDDERQSIPSVLQGEVA
560 570 580 590 600 610
670 680 690 700 710 720
mFLJ00 RLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDRQWQY
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
gi|119 RLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPLWIDRQWQY
620 630 640 650 660 670
730 740 750 760
mFLJ00 DANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA
::::::::::::::::::::::::::::::::::::.::::::::
gi|119 DANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA
680 690 700 710 720
769 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Mar 13 09:17:33 2009 done: Fri Mar 13 09:25:41 2009
Total Scan time: 1073.040 Total Display time: 0.330
Function used was FASTA [version 34.26.5 April 26, 2007]