# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mbe05021.fasta.nr -Q ../query/mFLJ00386.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00386, 769 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7877964 sequences Expectation_n fit: rho(ln(x))= 7.9124+/-0.000235; mu= 2.1574+/- 0.013 mean_var=268.8642+/-51.018, 0's: 34 Z-trim: 220 B-trim: 0 in 0/65 Lambda= 0.078218 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847528|dbj|BAD21436.1| mFLJ00386 protein [Mus ( 769) 5269 608.4 3.3e-171 gi|100817039|ref|NP_001035773.1| mediator complex ( 749) 5123 591.9 3e-166 gi|32451779|gb|AAH54779.1| Mediator complex subuni ( 749) 5106 590.0 1.1e-165 gi|73995885|ref|XP_849892.1| PREDICTED: similar to ( 749) 4718 546.2 1.7e-152 gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine ( 746) 4625 535.7 2.5e-149 gi|15559260|gb|AAH13985.1| Mediator complex subuni ( 748) 4621 535.3 3.4e-149 gi|194213957|ref|XP_001488170.2| PREDICTED: simila ( 748) 4574 530.0 1.3e-147 gi|45708378|gb|AAH03078.1| MED15 protein [Homo sap ( 767) 4495 521.1 6.5e-145 gi|29612457|gb|AAH49891.1| Med15 protein [Mus musc ( 651) 4491 520.5 8e-145 gi|119623358|gb|EAX02953.1| PC2 (positive cofactor ( 722) 4456 516.6 1.3e-143 gi|221040200|dbj|BAH11863.1| unnamed protein produ ( 722) 4450 516.0 2.1e-143 gi|194043420|ref|XP_001927322.1| PREDICTED: simila ( 747) 3847 447.9 6.6e-123 gi|194377598|dbj|BAG57747.1| unnamed protein produ ( 718) 3712 432.7 2.5e-118 gi|119623353|gb|EAX02948.1| PC2 (positive cofactor ( 677) 3668 427.7 7.5e-117 gi|47678605|emb|CAG30423.1| PCQAP [Homo sapiens] ( 674) 3659 426.7 1.5e-116 gi|55730907|emb|CAH92172.1| hypothetical protein [ ( 566) 3393 396.5 1.5e-107 gi|3037135|gb|AAC12944.1| TPA inducible protein [H ( 579) 3204 375.2 3.9e-101 gi|119623355|gb|EAX02950.1| PC2 (positive cofactor ( 667) 3128 366.7 1.6e-98 gi|148743887|gb|AAI42513.1| MED15 protein [Bos tau ( 711) 2991 351.3 7.6e-94 gi|149019754|gb|EDL77902.1| positive cofactor 2, m ( 790) 2925 343.9 1.4e-91 gi|119623354|gb|EAX02949.1| PC2 (positive cofactor ( 456) 2903 341.1 5.7e-91 gi|148665060|gb|EDK97476.1| positive cofactor 2, m ( 789) 2906 341.8 6.3e-91 gi|109093354|ref|XP_001084461.1| PREDICTED: simila ( 858) 2850 335.5 5.3e-89 gi|74151422|dbj|BAE38826.1| unnamed protein produc ( 639) 2844 334.7 7e-89 gi|27734440|sp|Q96RN5.2|MED15_HUMAN RecName: Full= ( 788) 2829 333.1 2.6e-88 gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo ( 811) 2828 333.0 2.9e-88 gi|114685221|ref|XP_525528.2| PREDICTED: similar t ( 947) 2827 333.0 3.4e-88 gi|74199527|dbj|BAE41448.1| unnamed protein produc ( 766) 2735 322.5 4e-85 gi|14276859|gb|AAK58424.1|AF328770_1 PC2-glutamine ( 667) 2700 318.4 5.6e-84 gi|20177999|sp|Q924H2.2|MED15_MOUSE RecName: Full= ( 792) 2700 318.5 6.3e-84 gi|118098691|ref|XP_415235.2| PREDICTED: similar t ( 821) 2689 317.3 1.5e-83 gi|21956190|gb|AAM83255.1|AF378334_1 ARC105 [Xenop ( 754) 2641 311.8 6.1e-82 gi|82185335|sp|Q6NS15.1|MED15_XENLA RecName: Full= ( 777) 2639 311.6 7.3e-82 gi|126325142|ref|XP_001376424.1| PREDICTED: simila ( 805) 2626 310.2 2.1e-81 gi|166203452|gb|ABY84679.1| mediator complex subun ( 792) 2623 309.8 2.6e-81 gi|166203454|gb|ABY84680.1| mediator complex subun ( 794) 2592 306.3 2.9e-80 gi|28374176|gb|AAH46263.1| LOC398566 protein [Xeno ( 846) 2541 300.6 1.6e-78 gi|193784960|dbj|BAG54113.1| unnamed protein produ ( 404) 2429 287.6 6.6e-75 gi|193784871|dbj|BAG54024.1| unnamed protein produ ( 404) 2426 287.2 8.4e-75 gi|50949442|emb|CAH10580.1| hypothetical protein [ ( 404) 2420 286.6 1.3e-74 gi|14043091|gb|AAH07529.1| MED15 protein [Homo sap ( 384) 2416 286.1 1.8e-74 gi|182890882|gb|AAI65669.1| Med15 protein [Danio r ( 809) 2376 282.0 6.4e-73 gi|82188674|sp|Q7ZVN7.1|MED15_DANRE RecName: Full= ( 809) 2369 281.2 1.1e-72 gi|117938842|gb|AAH03221.1| Med15 protein [Mus mus ( 310) 2086 248.7 2.5e-63 gi|2565065|gb|AAB91443.1| CTG7a [Homo sapiens] ( 349) 2016 240.9 6.5e-61 gi|223648474|gb|ACN10995.1| Mediator of RNA polyme ( 356) 2010 240.2 1.1e-60 gi|149522810|ref|XP_001519670.1| PREDICTED: simila ( 319) 1980 236.8 1e-59 gi|50949499|emb|CAH10623.1| hypothetical protein [ ( 277) 1834 220.2 8.6e-55 gi|119623360|gb|EAX02955.1| PC2 (positive cofactor ( 247) 1499 182.4 1.9e-43 gi|190660045|gb|EDV57237.1| GG24724 [Drosophila er ( 750) 1141 142.6 5.5e-31 >>gi|47847528|dbj|BAD21436.1| mFLJ00386 protein [Mus mus (769 aa) initn: 5269 init1: 5269 opt: 5269 Z-score: 3230.0 bits: 608.4 E(): 3.3e-171 Smith-Waterman score: 5269; 100.000% identity (100.000% similar) in 769 aa overlap (1-769:1-769) 10 20 30 40 50 60 mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS 250 260 270 280 290 300 310 320 330 340 350 360 mFLJ00 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ 310 320 330 340 350 360 370 380 390 400 410 420 mFLJ00 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP 370 380 390 400 410 420 430 440 450 460 470 480 mFLJ00 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ 430 440 450 460 470 480 490 500 510 520 530 540 mFLJ00 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR 490 500 510 520 530 540 550 560 570 580 590 600 mFLJ00 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ 550 560 570 580 590 600 610 620 630 640 650 660 mFLJ00 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ 610 620 630 640 650 660 670 680 690 700 710 720 mFLJ00 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR 670 680 690 700 710 720 730 740 750 760 mFLJ00 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA ::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA 730 740 750 760 >>gi|100817039|ref|NP_001035773.1| mediator complex subu (749 aa) initn: 5123 init1: 5123 opt: 5123 Z-score: 3141.1 bits: 591.9 E(): 3e-166 Smith-Waterman score: 5123; 100.000% identity (100.000% similar) in 749 aa overlap (21-769:1-749) 10 20 30 40 50 60 mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD :::::::::::::::::::::::::::::::::::::::: gi|100 MDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD 10 20 30 40 70 80 90 100 110 120 mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ 290 300 310 320 330 340 370 380 390 400 410 420 mFLJ00 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP 350 360 370 380 390 400 430 440 450 460 470 480 mFLJ00 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ 410 420 430 440 450 460 490 500 510 520 530 540 mFLJ00 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR 470 480 490 500 510 520 550 560 570 580 590 600 mFLJ00 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ 530 540 550 560 570 580 610 620 630 640 650 660 mFLJ00 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ 590 600 610 620 630 640 670 680 690 700 710 720 mFLJ00 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR 650 660 670 680 690 700 730 740 750 760 mFLJ00 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA ::::::::::::::::::::::::::::::::::::::::::::::::: gi|100 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA 710 720 730 740 >>gi|32451779|gb|AAH54779.1| Mediator complex subunit 15 (749 aa) initn: 5106 init1: 5106 opt: 5106 Z-score: 3130.7 bits: 590.0 E(): 1.1e-165 Smith-Waterman score: 5106; 99.733% identity (99.866% similar) in 749 aa overlap (21-769:1-749) 10 20 30 40 50 60 mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD :::::::::::::::::::::::::::::::::::::::: gi|324 MDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD 10 20 30 40 70 80 90 100 110 120 mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL 110 120 130 140 150 160 190 200 210 220 230 240 mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|324 QQQQQQQQQQQFQQQQAALQQHQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQ 170 180 190 200 210 220 250 260 270 280 290 300 mFLJ00 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 QQHLIKLHHQSQQQQIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQPPPS 230 240 250 260 270 280 310 320 330 340 350 360 mFLJ00 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQ :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|324 QALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPSQSQSQPLVSQAQALPGPMLYAAQ 290 300 310 320 330 340 370 380 390 400 410 420 mFLJ00 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 QQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSP 350 360 370 380 390 400 430 440 450 460 470 480 mFLJ00 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 SPGQQVQTPQSMPPPPQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ 410 420 430 440 450 460 490 500 510 520 530 540 mFLJ00 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 NFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDR 470 480 490 500 510 520 550 560 570 580 590 600 mFLJ00 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 KKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQ 530 540 550 560 570 580 610 620 630 640 650 660 mFLJ00 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 PLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQ 590 600 610 620 630 640 670 680 690 700 710 720 mFLJ00 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 GEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDR 650 660 670 680 690 700 730 740 750 760 mFLJ00 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA ::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 QWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA 710 720 730 740 >>gi|73995885|ref|XP_849892.1| PREDICTED: similar to pos (749 aa) initn: 3502 init1: 3502 opt: 4718 Z-score: 2894.1 bits: 546.2 E(): 1.7e-152 Smith-Waterman score: 4718; 92.328% identity (95.635% similar) in 756 aa overlap (21-769:1-749) 10 20 30 40 50 60 mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD ::::::::::::.::::::::::::::::::::::::::: gi|739 MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKD 10 20 30 40 70 80 90 100 110 120 mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG ::::::::::::::::::::::::::::::::::::::::::::::::::::. :::::: gi|739 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL :: ::::::::::::::.::::.::::::::::::::::::::::::.:::::::::::: gi|739 MPSRGPGQSLGGMGGLGTMGQPMPLSGQPPPGTSGMAPHGMAVVSTAAPQTQLQLQQVAL 110 120 130 140 150 160 190 200 210 220 230 mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL---QQ :::: :::::::.::::::::::::::::::::::::::::::::::::: :: gi|739 QQQQ-----QQFQQQQVALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQQLQQQQ 170 180 190 200 210 240 250 260 270 280 290 mFLJ00 QQQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQALQAQPPMQQPSMQQPQ :::::::::::::.::: : :::::::::::::::::::::: :::::::.::: ::::: gi|739 QQQQQHLIKLHHQNQQQIQQQQQQLQRMAQLQLQQQQQQQQQ-ALQAQPPLQQPPMQQPQ 220 230 240 250 260 270 300 310 320 330 340 350 mFLJ00 PPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPML :::::::::::. .::::::::::: :: :.::::: :.:::::.::::::: :::: :: gi|739 PPPSQALPQQLQPMHHPQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAPALPGQML 280 290 300 310 320 330 360 370 380 390 400 410 mFLJ00 YAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTM :: : :::.::::::::: ::::::: ::::::::::: .::..:.:. ::::::.:::: gi|739 YA-QPQLKLVRAPMVVQQQQVQPQVQPVQPQVQPQAAVPTAQASQIVGSGVQVSQNSLTM 340 350 360 370 380 390 420 430 440 450 460 470 mFLJ00 LSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQPSQSP ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|739 LSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSP 400 410 420 430 440 450 480 490 500 510 520 530 mFLJ00 VTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINK 460 470 480 490 500 510 540 550 560 570 580 590 mFLJ00 IDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|739 IDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPT 520 530 540 550 560 570 600 610 620 630 640 650 mFLJ00 KQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQ ::: :::::::::::::::::::::::::::::: :::::::..::::.::::::.:::: gi|739 KQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRFEDDERQ 580 590 600 610 620 630 660 670 680 690 700 710 mFLJ00 SIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQ 640 650 660 670 680 690 720 730 740 750 760 mFLJ00 SPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA ::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA 700 710 720 730 740 >>gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-ric (746 aa) initn: 2669 init1: 2669 opt: 4625 Z-score: 2837.4 bits: 535.7 E(): 2.5e-149 Smith-Waterman score: 4625; 91.041% identity (94.466% similar) in 759 aa overlap (21-769:1-746) 10 20 30 40 50 60 mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD ::::::::::::.::::::::::::::::::::::::::: gi|142 MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKD 10 20 30 40 70 80 90 100 110 120 mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG ::::::::::::::::::::::::::::::::::::::::::::::::::::. :::::: gi|142 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL ::::::::::::::.:::::::. :::::::::::::::.:::::::::::::::::::: gi|142 MPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVAL 110 120 130 140 150 160 190 200 210 220 230 mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL--QQQ :::::::: : :::::::::::::::: :::::::.:::::::::::::: ::: gi|142 QQQQQQQQFQ--QQQQAALQQQQQQQQQ----QQFQAQQSAMQQQFQAVVQQQQQLQQQQ 170 180 190 200 210 240 250 260 270 280 290 mFLJ00 QQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQ----ALQAQPPMQQPSMQ ::::::::::::.::: : :::::::.::::::::::::::: :::::::.::: :: gi|142 QQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQALQAQPPIQQPPMQ 220 230 240 250 260 270 300 310 320 330 340 350 mFLJ00 QPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPG ::::::::::::::.:.:: :::::::: :: :.::::: :.:::::.:::::::::::: gi|142 QPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPG 280 290 300 310 320 330 360 370 380 390 400 410 mFLJ00 PMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSS :::. : ::::::::::::: :::::: : :.:::.::.:::::::::::::: gi|142 QMLYT-QPPLKFVRAPMVVQQPPVQPQVQ------QQQTAVQTAQAAQMVAPGVQVSQSS 340 350 360 370 380 420 430 440 450 460 470 mFLJ00 LTMLSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQPS : :::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|142 LPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPS 390 400 410 420 430 440 480 490 500 510 520 530 mFLJ00 QSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|142 QSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRM 450 460 470 480 490 500 540 550 560 570 580 590 mFLJ00 INKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|142 INKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPV 510 520 530 540 550 560 600 610 620 630 640 650 mFLJ00 LPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEED ::::: :::::::::::::::::::::::::::::: :::::::..::::.::::.:.: gi|142 PPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLEDD 570 580 590 600 610 620 660 670 680 690 700 710 mFLJ00 ERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADY ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|142 ERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADY 630 640 650 660 670 680 720 730 740 750 760 mFLJ00 PAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA :::::.::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|142 PAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA 690 700 710 720 730 740 >>gi|15559260|gb|AAH13985.1| Mediator complex subunit 15 (748 aa) initn: 2582 init1: 2582 opt: 4621 Z-score: 2834.9 bits: 535.3 E(): 3.4e-149 Smith-Waterman score: 4621; 90.802% identity (94.218% similar) in 761 aa overlap (21-769:1-748) 10 20 30 40 50 60 mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD ::::::::::::.::::::::::::::::::::::::::: gi|155 MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKD 10 20 30 40 70 80 90 100 110 120 mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG ::::::::::::::::::::::::::::::::::::::::::::::::::::. :::::: gi|155 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL ::::::::::::::.:::::::. :::::::::::::::.:::::::::::::::::::: gi|155 MPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVAL 110 120 130 140 150 160 190 200 210 220 230 mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL--QQQ :::::::: : :::::::::::::::: :::::::.:::::::::::::: ::: gi|155 QQQQQQQQFQ--QQQQAALQQQQQQQQQ----QQFQAQQSAMQQQFQAVVQQQQQLQQQQ 170 180 190 200 210 240 250 260 270 280 290 mFLJ00 QQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQ------ALQAQPPMQQPS ::::::::::::.::: : :::::::.::::::::::::::: :::::::.::: gi|155 QQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPP 220 230 240 250 260 270 300 310 320 330 340 350 mFLJ00 MQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQAL ::::::::::::::::.:.:: :::::::: :: :.::::: :.:::::.:::::::::: gi|155 MQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQAL 280 290 300 310 320 330 360 370 380 390 400 410 mFLJ00 PGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQ :: :::. : ::::::::::::: :::::: : :.:::.::.:::::::::::: gi|155 PGQMLYT-QPPLKFVRAPMVVQQPPVQPQVQ------QQQTAVQTAQAAQMVAPGVQVSQ 340 350 360 370 380 420 430 440 450 460 mFLJ00 SSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQ ::: :::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|155 SSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQ 390 400 410 420 430 440 470 480 490 500 510 520 mFLJ00 PSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|155 PSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLR 450 460 470 480 490 500 530 540 550 560 570 580 mFLJ00 RMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|155 RMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPP 510 520 530 540 550 560 590 600 610 620 630 640 mFLJ00 PVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFE :: ::::: :::::::::::::::::::::::::::::: :::::::..::::.::::.: gi|155 PVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLE 570 580 590 600 610 620 650 660 670 680 690 700 mFLJ00 EDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPA .:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|155 DDERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPA 630 640 650 660 670 680 710 720 730 740 750 760 mFLJ00 DYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSA :::::::.::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|155 DYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSA 690 700 710 720 730 740 mFLJ00 A : gi|155 A >>gi|194213957|ref|XP_001488170.2| PREDICTED: similar to (748 aa) initn: 2498 init1: 2498 opt: 4574 Z-score: 2806.3 bits: 530.0 E(): 1.3e-147 Smith-Waterman score: 4633; 90.407% identity (94.218% similar) in 761 aa overlap (21-769:1-748) 10 20 30 40 50 60 mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD :::.:::::::::::::::::::::::::::::::::::: gi|194 MDVTGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKD 10 20 30 40 70 80 90 100 110 120 mFLJ00 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIG ::::::::::::::::::::::::::::::::::::::::::::::::::::. :::::: gi|194 MESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPATGAAGIG 50 60 70 80 90 100 130 140 150 160 170 180 mFLJ00 MPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVAL :: :::::::::::::::::::.:::::::::::::::::::::::.::::::::::::: gi|194 MPSRGPGQSLGGMGGLGAMGQPMPLSGQPPPGTSGMAPHGMAVVSTTTPQTQLQLQQVAL 110 120 130 140 150 160 190 200 210 220 230 mFLJ00 QQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQLQ---Q ::: :::::::.::::::::::: :::::::::::::::::::: : : gi|194 QQQ------QQFQQQQVALQQQQQQQQQ------FQAQQNAMQQQFQAVVQQQQQQLQQQ 170 180 190 200 240 250 260 270 280 290 mFLJ00 QQQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQ-----ALQAQPPMQQPS :::::::::::::.::: : ::::::::::::::::::::::: :::::::.::: gi|194 QQQQQHLIKLHHQNQQQLQQQQQQLQRMAQLQLQQQQQQQQQQQQQQQALQAQPPIQQPP 210 220 230 240 250 260 300 310 320 330 340 350 mFLJ00 MQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQAL ::::::::::::::::.:.::::::::::: :: .::::: :.:::::.::::::: : gi|194 MQQPQPPPSQALPQQLQQMHHPQHHQPPPQPQQPTVAQNQPSQLPPQSQTQPLVSQAPPL 270 280 290 300 310 320 360 370 380 390 400 410 mFLJ00 PGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQ :: :.:. :::::.:: ::::::::::::::::::::: :.:: .::..:.:. :::::: gi|194 PGQMMYT-QQQLKLVRPPMVVQQPQVQPQVQQVQPQVQQQTAVPTAQASQIVGSGVQVSQ 330 340 350 360 370 380 420 430 440 450 460 mFLJ00 SSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQ .::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|194 NSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQ 390 400 410 420 430 440 470 480 490 500 510 520 mFLJ00 PSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLR 450 460 470 480 490 500 530 540 550 560 570 580 mFLJ00 RMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPP 510 520 530 540 550 560 590 600 610 620 630 640 mFLJ00 PVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFE :: ::::: :::::::::::::::::::::::::::::: ::::::...::::.:::.:: gi|194 PVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPVTAPVVCARKRKFE 570 580 590 600 610 620 650 660 670 680 690 700 mFLJ00 EDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPA :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EDEKQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPA 630 640 650 660 670 680 710 720 730 740 750 760 mFLJ00 DYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSA 690 700 710 720 730 740 mFLJ00 A : gi|194 A >>gi|45708378|gb|AAH03078.1| MED15 protein [Homo sapiens (767 aa) initn: 2582 init1: 2582 opt: 4495 Z-score: 2758.0 bits: 521.1 E(): 6.5e-145 Smith-Waterman score: 4495; 87.051% identity (91.154% similar) in 780 aa overlap (2-769:5-767) 10 20 30 40 50 mFLJ00 RRRRRGWPVGTRATRVGAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKS :::: : : ::. .: . :. : .. . :::::::::::::: gi|457 ARGLRRRRWRPSGIRAAGAGEQAWTFPGK----RPTGGAPPSGRSCEDAMRKAGVAHSKS 10 20 30 40 50 60 70 80 90 100 110 mFLJ00 SKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::. ::: gi|457 SKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAA 60 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 GIGMPPRGPGQSLGGMGGLGAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQ :::::::::::::::::.::: :::. :::::::::::::::.::::::::::::::::: gi|457 GIGMPPRGPGQSLGGMGSLGATGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQ 120 130 140 150 160 170 180 190 200 210 220 230 mFLJ00 VALQQQQQQQQQQQFQQQQAALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL-- ::::::::::: : :::::::::::::::::: :::::.:::::::::::::: gi|457 VALQQQQQQQQFQ--QQQQAALQQQQQQQQQQQ----FQAQQSAMQQQFQAVVQQQQQLQ 180 190 200 210 220 230 240 250 260 270 280 mFLJ00 QQQQQQQHLIKLHHQSQQQ-QIQQQQLQRMAQLQLQQQQQQQQQQ------ALQAQPPMQ :::::::::::::::.::: : :::::::.::::::::::::::: :::::::.: gi|457 QQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQ 240 250 260 270 280 290 290 300 310 320 330 340 mFLJ00 QPSMQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQA :: ::::::::::::::::.:.:: :::::::: :: :.::::: :.:::::.::::::: gi|457 QPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQA 300 310 320 330 340 350 350 360 370 380 390 400 mFLJ00 QALPGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQ ::::: :::. : ::::::::::::: ::::::: :.:::.::.::::::::: gi|457 QALPGQMLYT-QPPLKFVRAPMVVQQPPVQPQVQQ------QQTAVQTAQAAQMVAPGVQ 360 370 380 390 400 410 420 430 440 450 460 mFLJ00 VSQSSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSP :::::: :::::::::::::::::::::::::::: :::::::::::::::::::::: gi|457 VSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSP 410 420 430 440 450 460 470 480 490 500 510 520 mFLJ00 SPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 SPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIE 470 480 490 500 510 520 530 540 550 560 570 580 mFLJ00 PLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 PLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTP 530 540 550 560 570 580 590 600 610 620 630 640 mFLJ00 PPPPVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKR ::::: ::::: :::::::::::::::::::::::::::::: :::::::..::::.::: gi|457 PPPPVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKR 590 600 610 620 630 640 650 660 670 680 690 700 mFLJ00 RFEEDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELS :.:.:::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|457 RLEDDERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELS 650 660 670 680 690 700 710 720 730 740 750 760 mFLJ00 VPADYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQAC ::::::::::.::::::::::::::::::::::::::::::::::::::::::::.:::: gi|457 VPADYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQAC 710 720 730 740 750 760 mFLJ00 LSAA :::: gi|457 LSAA >>gi|29612457|gb|AAH49891.1| Med15 protein [Mus musculus (651 aa) initn: 4491 init1: 4491 opt: 4491 Z-score: 2756.3 bits: 520.5 E(): 8e-145 Smith-Waterman score: 4491; 100.000% identity (100.000% similar) in 651 aa overlap (119-769:1-651) 90 100 110 120 130 140 mFLJ00 IHNKKSQASVSDPMNALQSLTGGPTPGAAGIGMPPRGPGQSLGGMGGLGAMGQPLPLSGQ :::::::::::::::::::::::::::::: gi|296 IGMPPRGPGQSLGGMGGLGAMGQPLPLSGQ 10 20 30 150 160 170 180 190 200 mFLJ00 PPPGTSGMAPHGMAVVSTATPQTQLQLQQVALQQQQQQQQQQQFQQQQAALQQQQQQQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 PPPGTSGMAPHGMAVVSTATPQTQLQLQQVALQQQQQQQQQQQFQQQQAALQQQQQQQQQ 40 50 60 70 80 90 210 220 230 240 250 260 mFLJ00 QQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQQQHLIKLHHQSQQQQIQQQQLQRMAQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 QQQQQQFQAQQNAMQQQFQAVVQQQQLQQQQQQQHLIKLHHQSQQQQIQQQQLQRMAQLQ 100 110 120 130 140 150 270 280 290 300 310 320 mFLJ00 LQQQQQQQQQQALQAQPPMQQPSMQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 LQQQQQQQQQQALQAQPPMQQPSMQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIA 160 170 180 190 200 210 330 340 350 360 370 380 mFLJ00 QNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 QNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQV 220 230 240 250 260 270 390 400 410 420 430 440 mFLJ00 QPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPGSQPNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 QPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSPSPGQQVQTPQSMPPPPQPSPQPGSQPNS 280 290 300 310 320 330 450 460 470 480 490 500 mFLJ00 NVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 NVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQA 340 350 360 370 380 390 510 520 530 540 550 560 mFLJ00 EEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 EEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQK 400 410 420 430 440 450 570 580 590 600 610 620 mFLJ00 CEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 CEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQPLLDAVLANIRSPVFNHSLYRTFVPAMM 460 470 480 490 500 510 630 640 650 660 670 680 mFLJ00 AIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 AIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQGEVARLDPKFLVNLDPSHCSNNGTVHLI 520 530 540 550 560 570 690 700 710 720 730 740 mFLJ00 CKLDDKDLPSVPPLELSVPADYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|296 CKLDDKDLPSVPPLELSVPADYPAQSPMWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKH 580 590 600 610 620 630 750 760 mFLJ00 SVTALLNTWAQSIHQACLSAA ::::::::::::::::::::: gi|296 SVTALLNTWAQSIHQACLSAA 640 650 >>gi|119623358|gb|EAX02953.1| PC2 (positive cofactor 2, (722 aa) initn: 2582 init1: 2582 opt: 4456 Z-score: 2734.5 bits: 516.6 E(): 1.3e-143 Smith-Waterman score: 4456; 90.612% identity (94.014% similar) in 735 aa overlap (47-769:1-722) 20 30 40 50 60 70 mFLJ00 GAPGMDVSGQETDWRSAAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYL :::::::::::::::::::::::::::::: gi|119 MRKAGVAHSKSSKDMESHVFLKAKTRDEYL 10 20 30 80 90 100 110 120 130 mFLJ00 SLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIGMPPRGPGQSLGGMGGL ::::::::::::::::::::::::::::::::::::. ::::::::::::::::::::.: gi|119 SLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSL 40 50 60 70 80 90 140 150 160 170 180 190 mFLJ00 GAMGQPLPLSGQPPPGTSGMAPHGMAVVSTATPQTQLQLQQVALQQQQQQQQQQQFQQQQ ::::::. :::::::::::::::.:::::::::::::::::::::::::::: : :::: gi|119 GAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQ--QQQQ 100 110 120 130 140 200 210 220 230 240 250 mFLJ00 AALQQQQQQQQQQQQQQQFQAQQNAMQQQFQAVVQQQQL--QQQQQQQHLIKLHHQSQQQ :::::::::::::: :::::.:::::::::::::: :::::::::::::::.::: gi|119 AALQQQQQQQQQQQ----FQAQQSAMQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQ 150 160 170 180 190 200 260 270 280 290 300 mFLJ00 -QIQQQQLQRMAQLQLQQQQQQQQQQ------ALQAQPPMQQPSMQQPQPPPSQALPQQL : :::::::.::::::::::::::: :::::::.::: :::::::::::::::: gi|119 IQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQL 210 220 230 240 250 260 310 320 330 340 350 360 mFLJ00 SQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLVSQAQALPGPMLYAAQQQLKFVR .:.:: :::::::: :: :.::::: :.:::::.:::::::::::: :::. : ::::: gi|119 QQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYT-QPPLKFVR 270 280 290 300 310 320 370 380 390 400 410 420 mFLJ00 APMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAPGVQVSQSSLTMLSSPSPGQQVQ :::::::: ::::::: :.:::.::.::::::::::::::: :::::::::::: gi|119 APMVVQQPPVQPQVQQ------QQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQ 330 340 350 360 370 430 440 450 460 470 480 mFLJ00 TPQSMPPPPQPSPQPG---SQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSV :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|119 TPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSV 380 390 400 410 420 430 490 500 510 520 530 540 mFLJ00 PSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDL 440 450 460 470 480 490 550 560 570 580 590 600 mFLJ00 SKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVLPTKQQDLCQPLLD :::::::::::::::::::::::::::::::::::::::::::::: ::::: ::::::: gi|119 SKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPTKQQYLCQPLLD 500 510 520 530 540 550 610 620 630 640 650 660 mFLJ00 AVLANIRSPVFNHSLYRTFVPAMMAIHGPPIVSPVVCSRKRRFEEDERQSIPNVLQGEVA ::::::::::::::::::::::: :::::::..::::.::::.:.:::::::.::::::: gi|119 AVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLEDDERQSIPSVLQGEVA 560 570 580 590 600 610 670 680 690 700 710 720 mFLJ00 RLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPMWIDRQWQY :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|119 RLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPLWIDRQWQY 620 630 640 650 660 670 730 740 750 760 mFLJ00 DANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSIHQACLSAA ::::::::::::::::::::::::::::::::::::.:::::::: gi|119 DANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA 680 690 700 710 720 769 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 09:17:33 2009 done: Fri Mar 13 09:25:41 2009 Total Scan time: 1073.040 Total Display time: 0.330 Function used was FASTA [version 34.26.5 April 26, 2007]