# /hgtech/tools/solaris8/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -Oon22450.fasta.nr -Q on22450.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 on22450, 94 aa vs /cdna2/lib/nr/nr library 4381652725 residues in 12843305 sequences statistics sampled from 60000 to 12842690 sequences Expectation_n fit: rho(ln(x))= 4.3832+/-0.00018; mu= 7.1573+/- 0.010 mean_var=56.7842+/-11.119, 0's: 26 Z-trim: 28 B-trim: 0 in 0/65 Lambda= 0.170200 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(12843305) gi|399353|sp|Q01523.1|DEF5_HUMAN RecName: Full=Def ( 94) 604 155.6 1.6e-36 gi|62286497|sp|Q5G861.1|DEF5_PANTR RecName: Full=D ( 94) 570 147.3 5.3e-34 gi|297713341|ref|XP_002833147.1| PREDICTED: defens ( 94) 513 133.3 8.7e-30 gi|297682229|ref|XP_002818829.1| PREDICTED: defens ( 94) 501 130.3 6.7e-29 gi|109085551|ref|XP_001083971.1| PREDICTED: defens ( 94) 477 124.4 4e-27 gi|58429942|gb|AAW78346.1| defensin alpha 2 [Papio ( 94) 460 120.2 7.2e-26 gi|57491015|gb|AAW51368.1| alpha-defensin 4 precur ( 94) 450 117.8 3.9e-25 gi|38502898|sp|P82319.1|DEF4_MACMU RecName: Full=N ( 94) 448 117.3 5.5e-25 gi|57490984|gb|AAW51367.1| alpha-defensin 3 precur ( 94) 446 116.8 7.8e-25 gi|38502899|sp|P82320.1|DEF6_MACMU RecName: Full=N ( 94) 446 116.8 7.8e-25 gi|6409292|gb|AAF07927.1|AF184161_1 alpha-defensin ( 94) 445 116.6 9.2e-25 gi|195542161|gb|ACF98291.1| oral alpha defensin 1 ( 93) 432 113.4 8.4e-24 gi|58429940|gb|AAW78345.1| defensin alpha 1 [Papio ( 97) 431 113.1 1e-23 gi|195542163|gb|ACF98292.1| oral alpha defensin 2A ( 93) 426 111.9 2.3e-23 gi|57491028|gb|AAW51369.1| alpha-defensin 5 precur ( 97) 421 110.7 5.6e-23 gi|57490954|gb|AAW51366.1| alpha-defensin 2 precur ( 94) 410 108.0 3.6e-22 gi|296221577|ref|XP_002756826.1| PREDICTED: defens ( 94) 404 106.5 9.9e-22 gi|57490887|gb|AAW51365.1| alpha-defensin 1 precur ( 94) 402 106.0 1.4e-21 gi|57491045|gb|AAW51370.1| alpha-defensin 6 precur ( 94) 393 103.8 6.5e-21 gi|256261645|gb|ACU65943.1| alpha-defensin [Mammut ( 94) 328 87.8 4.1e-16 gi|2494046|sp|Q62715.1|DEF2_RAT RecName: Full=Neut ( 94) 326 87.3 5.8e-16 gi|2494045|sp|Q62716.1|DEF1_RAT RecName: Full=Neut ( 94) 323 86.6 9.6e-16 gi|296221565|ref|XP_002756821.1| PREDICTED: neutro ( 97) 300 81.0 4.9e-14 gi|2494048|sp|Q62714.1|DEF4_RAT RecName: Full=Neut ( 93) 297 80.2 8e-14 gi|257167935|gb|ACV49741.1| Paneth cell-specific a ( 95) 296 80.0 9.6e-14 gi|257167933|gb|ACV49740.1| Paneth cell-specific a ( 95) 293 79.2 1.6e-13 gi|257167929|gb|ACV49738.1| Paneth cell-specific a ( 95) 291 78.8 2.3e-13 gi|297682221|ref|XP_002818825.1| PREDICTED: defens ( 100) 288 78.0 3.9e-13 gi|49823540|gb|AAT68753.1| defensin alpha 10 [Ratt ( 91) 287 77.8 4.3e-13 gi|297682223|ref|XP_002818826.1| PREDICTED: neutro ( 97) 287 77.8 4.5e-13 gi|62286495|sp|Q5G859.1|DEF7_PANTR RecName: Full=D ( 94) 283 76.8 8.7e-13 gi|257167931|gb|ACV49739.1| Paneth cell-specific a ( 95) 283 76.8 8.8e-13 gi|62286498|sp|Q5G862.1|DEF4_PANTR RecName: Full=N ( 97) 283 76.8 8.9e-13 gi|114618712|ref|XP_001146558.1| PREDICTED: simila ( 94) 281 76.3 1.2e-12 gi|114618710|ref|XP_001146621.1| PREDICTED: simila ( 101) 281 76.3 1.3e-12 gi|118419|sp|P01376.2|DEF3_RABIT RecName: Full=Cor ( 95) 280 76.1 1.5e-12 gi|399352|sp|P12838.2|DEF4_HUMAN RecName: Full=Neu ( 97) 280 76.1 1.5e-12 gi|62286499|sp|Q5G863.1|DEF1_PANTR RecName: Full=N ( 94) 278 75.6 2e-12 gi|114618704|ref|XP_001146335.1| PREDICTED: simila ( 101) 278 75.6 2.2e-12 gi|119600894|gb|EAW80488.1| hCG1779270 [Homo sapie ( 94) 277 75.3 2.4e-12 gi|109085533|ref|XP_001098733.1| PREDICTED: defens ( 100) 276 75.1 3e-12 gi|297713384|ref|XP_002833165.1| PREDICTED: neutro ( 94) 275 74.8 3.4e-12 gi|257167909|gb|ACV49728.1| Paneth cell-specific a ( 98) 275 74.8 3.5e-12 gi|1200182|gb|AAC50382.1| defensin 6 [Homo sapiens ( 101) 275 74.8 3.6e-12 gi|257167917|gb|ACV49732.1| Paneth cell-specific a ( 98) 273 74.3 4.9e-12 gi|399354|sp|Q01524.1|DEF6_HUMAN RecName: Full=Def ( 100) 272 74.1 5.9e-12 gi|118422|sp|P01377.2|DEF4_RABIT RecName: Full=Cor ( 95) 271 73.8 6.8e-12 gi|257167913|gb|ACV49730.1| Paneth cell-specific a ( 98) 271 73.9 6.9e-12 gi|257167911|gb|ACV49729.1| Paneth cell-specific a ( 98) 271 73.9 6.9e-12 gi|62286496|sp|Q5G860.1|DEF6_PANTR RecName: Full=D ( 100) 271 73.9 7e-12 >>gi|399353|sp|Q01523.1|DEF5_HUMAN RecName: Full=Defensi (94 aa) initn: 604 init1: 604 opt: 604 Z-score: 815.6 bits: 155.6 E(): 1.6e-36 Smith-Waterman score: 604; 100.000% identity (100.000% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|399 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR :::::::::::::::::::::::::::::::::: gi|399 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR 70 80 90 >>gi|62286497|sp|Q5G861.1|DEF5_PANTR RecName: Full=Defen (94 aa) initn: 570 init1: 570 opt: 570 Z-score: 770.5 bits: 147.3 E(): 5.3e-34 Smith-Waterman score: 570; 94.681% identity (96.809% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR :::::::: :.:. ::::::::::::::::::: gi|622 ARATCYCRIGHCTILESLSGVCEISGRLYRLCCR 70 80 90 >>gi|297713341|ref|XP_002833147.1| PREDICTED: defensin-5 (94 aa) initn: 513 init1: 513 opt: 513 Z-score: 694.8 bits: 133.3 E(): 8.7e-30 Smith-Waterman score: 513; 85.106% identity (91.489% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::::::::::::::::::::::::::::.:::::::::::::.::::::::.::.: :: gi|297 MRTIAILAAILLVALQAQAESLQERADEAATQKQSGEDNQDLAVSFAGNGLSTLRASDSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR ::.::::: : ::. :: :: : :::: :::::: gi|297 ARSTCYCRIGLCAAIESYSGRCYISGRRYRLCCR 70 80 90 >>gi|297682229|ref|XP_002818829.1| PREDICTED: defensin-5 (94 aa) initn: 501 init1: 501 opt: 501 Z-score: 678.9 bits: 130.3 E(): 6.7e-29 Smith-Waterman score: 501; 81.915% identity (91.489% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::.::::::::::::::::::::::::..:::::::::::::.::::::::.::.: :: gi|297 MRTLAILAAILLVALQAQAESLQERADETATQKQSGEDNQDLAVSFAGNGLSTLRASDSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR ::.::::: : ::. :: :: : :.:: :::::: gi|297 ARSTCYCRIGLCAAIESYSGRCYINGRSYRLCCR 70 80 90 >>gi|109085551|ref|XP_001083971.1| PREDICTED: defensin-5 (94 aa) initn: 477 init1: 477 opt: 477 Z-score: 647.1 bits: 124.4 E(): 4e-27 Smith-Waterman score: 477; 78.495% identity (89.247% similar) in 93 aa overlap (1-93:1-93) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::..::::::::::::::::::::::::.::.: :::.::::.:: ::::.::.:::: gi|109 MRTLTILAAILLVALQAQAESLQERADEAATQEQPGEDDQDLAVSFEENGLSTLRASGSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR :: ::::: ::: ::: :: :.::::.: ::: gi|109 ARRTCYCRIGRCFRRESSSGRCRISGRIYILCCH 70 80 90 >>gi|58429942|gb|AAW78346.1| defensin alpha 2 [Papio anu (94 aa) initn: 460 init1: 460 opt: 460 Z-score: 624.5 bits: 120.2 E(): 7.2e-26 Smith-Waterman score: 460; 75.532% identity (87.234% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::.::::::::::::::::::::::::..::.: :::.::::.:: ::::.::.:::: gi|584 MRTLAILAAILLVALQAQAESLQERADEVATQEQPGEDDQDLAVSFEENGLSTLRASGSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR :: ::::::::: : : :: : ..: :.:::: gi|584 ARRTCYCRTGRCYTPEFHSGKCLFKGLTYKLCCR 70 80 90 >>gi|57491015|gb|AAW51368.1| alpha-defensin 4 precursor (94 aa) initn: 450 init1: 450 opt: 450 Z-score: 611.2 bits: 117.8 E(): 3.9e-25 Smith-Waterman score: 450; 72.340% identity (87.234% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::..::::::: .::::::::::::::..::.: :.:.::::.:: ::::.::.:::: gi|574 MRTLTILAAILLFTLQAQAESLQERADEVATQEQPGKDDQDLAVSFEENGLSTLRASGSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR :: ::::::::: : : :: : ..:: :.:::: gi|574 ARRTCYCRTGRCYTPEFHSGKCVFNGRTYKLCCR 70 80 90 >>gi|38502898|sp|P82319.1|DEF4_MACMU RecName: Full=Neutr (94 aa) initn: 448 init1: 448 opt: 448 Z-score: 608.6 bits: 117.3 E(): 5.5e-25 Smith-Waterman score: 448; 72.340% identity (85.106% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::::::::::: :: :::.:::: ::.:.::.: :::.::::.:: ::::.::.:::: gi|385 MRTIAILAAILLFALLAQAKSLQETADDAATQEQPGEDDQDLAVSFEENGLSTLRASGSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR :: :: :: ::: ::: :: :.:.::.. :::: gi|385 ARRTCRCRFGRCFRRESYSGSCNINGRIFSLCCR 70 80 90 >>gi|57490984|gb|AAW51367.1| alpha-defensin 3 precursor (94 aa) initn: 446 init1: 446 opt: 446 Z-score: 605.9 bits: 116.8 E(): 7.8e-25 Smith-Waterman score: 446; 71.277% identity (86.170% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::::::::::: .::::::::::::::..::.: :::.::.:.:: ::::.::.:::: gi|574 MRTIAILAAILLFSLQAQAESLQERADEVATQEQPGEDDQDFAVSFEENGLSTLRASGSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR :: :::::. :: : : .: :.. :: :.:::: gi|574 ARHTCYCRNKRCFTPEFHAGKCKVEGRTYKLCCR 70 80 90 >>gi|38502899|sp|P82320.1|DEF6_MACMU RecName: Full=Neutr (94 aa) initn: 446 init1: 446 opt: 446 Z-score: 605.9 bits: 116.8 E(): 7.8e-25 Smith-Waterman score: 446; 73.404% identity (84.043% similar) in 94 aa overlap (1-94:1-94) 10 20 30 40 50 60 on2245 MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ :::::::::::: :: :::.:::: ::::.::.: :::.::::.:: ::::.::.:::: gi|385 MRTIAILAAILLFALLAQAKSLQETADEAATQEQPGEDDQDLAVSFEENGLSTLRASGSQ 10 20 30 40 50 60 70 80 90 on2245 ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR :: :: :: ::: ::: :: :.:.::. :::: gi|385 ARRTCRCRFGRCFRRESYSGSCNINGRISSLCCR 70 80 90 94 residues in 1 query sequences 4381652725 residues in 12843305 library sequences Tcomplib [34.26] (4 proc) start: Fri Apr 22 02:50:08 2011 done: Fri Apr 22 02:56:30 2011 Total Scan time: 899.850 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]