hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20110422/iprscan-20110422-02563209/chunk_1/iprscan-20110422-02563209.nocrc
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Query sequence: on22450
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00048                                                  44.7    1.2e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00048    1/1      65    93 ..     1    34 []    44.7  1.2e-08

Alignments of top-scoring domains:
SM00048: domain 1 of 1, from 65 to 93: score 44.7, E = 1.2e-08
                   *->CyknGGiCRrrrCprrERriGtCrirGrrytfCC<-*
                      Cy     CR++rC  rE ++G+C+i+Gr+y++CC   
     on22450    65    CY-----CRTGRCATRESLSGVCEISGRLYRLCC    93   

//