hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20081107/iprscan-20081107-21212501/chunk_1/iprscan-20081107-21212501.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: on19334 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00063 188.6 6e-52 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00063 1/1 69 183 .. 1 130 [] 188.6 6e-52 Alignments of top-scoring domains: SM00063: domain 1 of 1, from 69 to 183: score 188.6, E = 6e-52 *->rClpePitiplCkdlgLPYNlTsmPNLlgHttQeEAgleYIleqFkP +C eP+++++C ++ LPY+ Ts+ + + ++QeEA+ + l + + on19334 69 PC--EPLRYNVCLGSVLPYGATSTLLAGDSDSQEEAHGK--LVLWSG 111 LlnvqkCspdlrfFLCsvYaPvCtedlpdepipPCRslCEavregCeplm L+n ++C++ ++++LC+vY+P+C++d+ + +P+R+lC+a+r +C+++ on19334 112 LRNAPRCWAVIQPLLCAVYMPKCENDR---VELPSRTLCQATRGPCAIVE 158 ekfGfaWPefLrCtedrFPvqndreelCmepnp<-* +++ +WP+fLrCt+drFP e+C+++++ on19334 159 RER--GWPDFLRCTPDRFP------EGCTNEVQ 183 //