hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20081029/iprscan-20081029-11372399/chunk_1/iprscan-20081029-11372399.nocrc
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Query sequence: on13133
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                  78.3    9.6e-19   3

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/3     200   224 ..     1    23 []    21.4     0.12
SM00355      2/3     230   254 ..     1    23 []    31.3  0.00013
SM00355      3/3     260   282 ..     1    23 []    25.5   0.0073

Alignments of top-scoring domains:
SM00355: domain 1 of 3, from 200 to 224: score 21.4, E = 0.12
                   *->ykCpi.gCgksfssk.aLkrHmrvH<-*
                      ++C+++gC k+++  ++Lk H+r+H   
     on13133   200    HRCHFnGCRKVYTKSsHLKAHQRTH    224  

SM00355: domain 2 of 3, from 230 to 254: score 31.3, E = 0.00013
                   *->ykCpi.gCgksfssk.aLkrHmrvH<-*
                      y+C+++gC ++f + ++L+rH r+H   
     on13133   230    YRCSWeGCEWRFARSdELTRHFRKH    254  

SM00355: domain 3 of 3, from 260 to 282: score 25.5, E = 0.0073
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC++ C+++fs+ ++L  Hm++H   
     on13133   260    FKCSH-CDRCFSRSdHLALHMKRH    282  

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