Human ORFeome
Gene/Protein Characteristic Table for ORH29295P
Order ORFeome clone(s) from : Japan || Other countries
Check our QC before Ordering.
Product ID ORH29295P
Clone name on22406
IMAGE Clone ID 100071813
Vector name pDONR223
Stop codon without
Genbank Acc HQ448386
Parent Genbank Acc BC069423.1
Parent gene symbol DEFA1
Description Homo sapiens defensin, alpha 1, mRNA (cDNA clone MGC:97418 IMAGE:7262694), complete cds.
Features of the cloned ORF sequence
Description

Length: 282 bp

Restriction map

Features of the protein sequence
Description

Length: 94 aa

Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
P59665 8e-38 100.0 Neutrophil defe...
Homo sapiens
P59666 2.5e-37 98.9 Neutrophil defe...
Homo sapiens
AAX36142 2.5e-37 98.9 defensin alpha ...
synthetic construct
Q5G863 3.5e-36 95.7 Neutrophil defe...
Pan troglodytes
XP_001146335 3.7e-36 95.7 similar to defe...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against ORFeome database (FASTA output, Multiple alignment)
Entry Exp ID%
on19485 2.3e-41 98.9
on12926 2.3e-41 98.9
on35387 3.8e-15 71.3
on22450 2e-14 69.1
on22474 5.2e-13 66.0
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR002366 1 53 PF00879 Defensin propeptide
IPR006081 66 94 PF00323 Alpha defensin
HMMSmart IPR006080 66 94 SM00048 Mammalian defensin
ScanRegExp IPR006081 66 94 PS00269 Alpha defensin

Order ORFeome clone(s) from Japan || Other countries
Send a message to office AT kazusa.or.jp