Miyakogusa Predicted Gene

chr6.CM0885.30.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0885
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q8RXH5_TOBAC 614 92.0 95.9 (tr|Q8RXH5) Osmotic stress-activated protein kinase OS=Nicotiana tabacum GN=OSAK PE=2 SV=1
TAIR_pep AT1G60940.2 595 88.3 94.3 | Symbols: SNRK2-10, SNRK2.10, SRK2B | SNRK2-10/SNRK2.10/SRK2B (SNF1-RELATED PROTEIN KINASE 2.10); kinase | chr1:22443063-22445561 REVERSE
Medicago IMGA|AC134322_17.5 614 83.2 89.5 Protein kinase chr02_pseudomolecule_IMGAG_V2 539586-542873 F EGN_Mt071002 20080227
Soybean Glyma12g29130.1 624 93.7 96.8  
Lotus Consensus KMC003929A_C01 71.9 78.2 78.2 KMC003929A_c01
3' Unigene BP082166 731 99.7 99.7 MR080f03_f
5' Unigene AV425617 200 100.0 100.0 MWM056h11_r
A list of protein families, domains and functional sites (searches in InterPro)
chr6.CM0885.30.nc length: 351 aa.
IPR000719 Protein kinase
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein amino acid phosphorylation    
BlastProDom PD000001 Q8RXH5_TOBAC_Q8RXH5; 8e-142 4-260
HMMPfam PF00069 Pkinase 2.4e-88 4-260
ProfileScan PS50011 PROTEIN_KINASE_DOM 47.382 4-260
ScanRegExp PS00107 PROTEIN_KINASE_ATP 8e-5 10-33
IPR002290 Serine/threonine protein kinase
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein amino acid phosphorylation    
HMMSmart SM00220 no description 2.5e-99 4-260
IPR008271 Serine/threonine protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein amino acid phosphorylation    
ScanRegExp PS00108 PROTEIN_KINASE_ST NA 119-131
IPR011009 Protein kinase-like
superfamily SSF56112 Protein 1.3e-74 2-262
no_ID  
Coil coil coiled-coil NA 321-346
Gene3D 1.10.510.10 no description 7.8e-60 82-339
Gene3D 3.30.200.20 no description 7.1e-20 1-82
HMMPanther PTHR22982 CALCIUM/CALMODULIN-DEPENDENT 7.2e-214 48-343
HMMPanther PTHR22982:SF58 SERINE/THREONINE-PROTEIN 7.2e-214 48-343
Seg seg seg NA 316-342
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr6.CM0885.30.nc 351 0.026 0.147 0.032 0.931 _ 2
Wolf-PSORT
chr6.CM0885.30.nc	cysk 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr6.CM0885.30.nc Not targeted -39.003 0 -6.312 51.04% -32.692