Miyakogusa Predicted Gene

chr6.CM0139.460.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0139
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7NWH0_VITVI 489 78.0 86.1 (tr|A7NWH0) Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019917001 PE=4 SV=1
TAIR_pep AT5G19150.2 466 69.6 79.8 | Symbols: | carbohydrate kinase family | chr5:6426282-6428404 REVERSE
Soybean Glyma07g38750.2 551 76.8 84.5  
Lotus Consensus KMC003727A_C01 252 99.2 99.2 KMC003727A_c01
3' Unigene KMC003727A_C01 488 98.8 98.8 KMC003727A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr6.CM0139.460.nc length: 341 aa.
IPR000631 Carbohydrate kinase
method AccNumber shortName E-value location
HMMPfam PF01256 Carb_kinase 2e-41 81-340
HMMTigr TIGR00196 yjeF_cterm: 6.7e-41 54-341
no_ID  
Gene3D 3.40.1190.20 no description 1e-37 52-341
HMMPanther PTHR12592 UNCHARACTERIZED 3.5e-68 16-314
superfamily SSF53613 Ribokinase-like 2.8e-44 53-339
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr6.CM0139.460.nc 341 0.195 0.474 0.075 0.012 M 4
Wolf-PSORT
chr6.CM0139.460.nc	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr6.CM0139.460.nc Not targeted -28.072 -2.175 -1.169 26.54% -24.728