Miyakogusa Predicted Gene

chr6.CM0055.30.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0055
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2Q1A6_MEDTR 355 69.8 77.0 (tr|A2Q1A6) DNA polymerase V OS=Medicago truncatula GN=MtrDRAFT_AC148396g28v2 PE=4 SV=1
TAIR_pep AT5G64420.1 235 53.8 67.1 | Symbols: | DNA polymerase V family | chr5:25773642-25778348 FORWARD
Medicago IMGA|AC148396_28.4 355 69.8 77.0 DNA polymerase V chr02_pseudomolecule_IMGAG_V2 2274194-2281553 E EGN_Mt071002 20080227
Soybean Glyma13g32760.1 371 72.1 80.1  
3' Unigene BP064999 965 96.6 96.6 GENLf050b01
A list of protein families, domains and functional sites (searches in InterPro)
chr6.CM0055.30.nd length: 270 aa.
IPR007015 DNA polymerase V
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006350 transcription    
HMMPanther PTHR13213 DNA 6.4e-79 36-270
HMMPfam PF04931 DNA_pol_phi 4.6e-14 152-214
no_ID  
HMMPanther PTHR13213:SF1 DNA 6.4e-79 36-270
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr6.CM0055.30.nd 270 0.803 0.024 0.035 0.591 C 4
Wolf-PSORT
chr6.CM0055.30.nd	nucl 8, chlo 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr6.CM0055.30.nd Not targeted -20.104 -0.330 -5.210 13.09% -14.565