Miyakogusa Predicted Gene

chr6.CM0037.1300.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0037
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7QS17_VITVI 724 58.4 69.9 (tr|A7QS17) Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005634001 PE=4 SV=1
TAIR_pep AT3G46920.1 575 64.8 74.7 | Symbols: | protein kinase family protein | chr3:17291415-17295842 REVERSE
Medicago IMGA|AC187278_34.5 1290 52.4 62.1 Octicosapeptide/Phox/Bem1p; Protein kinase chr08_pseudomolecule_IMGAG_V2 27410183-27417832 H EGN_Mt071002 20080227
Soybean Glyma15g24120.1 1642 62.5 69.7  
Lotus Consensus KMC004243A_C01 959 100.0 100.0 KMC004243A_c01
3' Unigene KMC004909A_C01 835 100.0 100.0 KMC004909A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr6.CM0037.1300.nd length: 1390 aa.
IPR000270 Octicosapeptide/Phox/Bem1p
method AccNumber shortName E-value location
HMMPfam PF00564 PB1 5.9e-25 205-294
HMMSmart SM00666 no description 1e-28 205-294
IPR000719 Protein kinase
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein amino acid phosphorylation    
BlastProDom PD000001 Q6K9I9_EEEEE_Q6K9I9; 0.002 1187-1356
1099-1174
ProfileScan PS50011 PROTEIN_KINASE_DOM 39.213 1100-1366
ScanRegExp PS00107 PROTEIN_KINASE_ATP 8e-5 1106-1137
IPR001245 Tyrosine protein kinase
Molecular Function GO:0004713 protein-tyrosine kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein amino acid phosphorylation    
FPrintScan PR00109 TYRKINASE 1.5e-15 1182-1195
1219-1237
1290-1312
1334-1356
HMMPfam PF07714 Pkinase_Tyr 1.9e-73 1100-1363
IPR002290 Serine/threonine protein kinase
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein amino acid phosphorylation    
HMMSmart SM00220 no description 2.2e-54 1100-1366
IPR008271 Serine/threonine protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein amino acid phosphorylation    
ScanRegExp PS00108 PROTEIN_KINASE_ST NA 1225-1237
IPR011009 Protein kinase-like
superfamily SSF56112 Protein 5.1e-77 1070-1367
no_ID  
Gene3D 1.10.510.10 no description 1.5e-49 1185-1374
Gene3D 3.30.200.20 no description 7.9e-15 1092-1184
HMMPanther PTHR23257 SERINE-THREONINE 2e-209 1092-1377
HMMPanther PTHR23257:SF68 SERINE/THREONINE 2e-209 1092-1377
Seg seg seg NA 65-71
177-188
394-405
435-446
770-781
1032-1036
1375-1389
superfamily SSF54277 CAD 0.00089 215-292
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr6.CM0037.1300.nd 1390 0.205 0.030 0.017 0.870 _ 2
Wolf-PSORT
chr6.CM0037.1300.nd	nucl 12, cyto 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr6.CM0037.1300.nd Not targeted -36.023 0 -4.222 44.07% -31.802