Miyakogusa Predicted Gene

chr5.LjT43D06.200.nd
Related links:
Predicted Sequence Links:
Genome Sequence: LjT43D06
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q9ZWP4_ROBPS 192 49.6 58.5 (tr|Q9ZWP4) Lectin-related polypeptide OS=Robinia pseudoacacia PE=2 SV=1
TAIR_pep AT5G65600.1 81.3 34.4 45.8 | Symbols: | legume lectin family protein / protein kinase family protein | chr5:26233352-26235379 REVERSE
Medicago IMGA|CT010515_11.5 165 47.3 60.6 Concanavalin A-like lectin/glucanase chr03_pseudomolecule_IMGAG_V2 6253880-6252776 F EGN_Mt071002 20080227
Soybean Glyma10g13450.1 115 39.4 51.7  
Lotus Consensus KMC003812A_C01 989 95.7 95.7 KMC003812A_c01
3' Unigene KMC003812A_C01 1021 95.8 95.8 KMC003812A_c01
5' Unigene R_KMC001127A_C01 906 95.8 95.8 R_KMC001127A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr5.LjT43D06.200.nd length: 219 aa.
IPR001220 Legume lectin, beta domain
method AccNumber shortName E-value location
Molecular Function GO:0005529 sugar binding    
BlastProDom PD000711 LEC_LOTTE_P19664; 1e-19 32-88
HMMPfam PF00139 Lectin_legB 6e-51 30-217
ScanRegExp PS00307 LECTIN_LEGUME_BETA NA 146-152
IPR008985 Concanavalin A-like lectin/glucanase
superfamily SSF49899 Concanavalin 1.3e-48 29-208
no_ID  
Gene3D 2.60.120.200 no description 1.1e-47 29-218
Seg seg seg NA 9-23
89-104
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr5.LjT43D06.200.nd 219 0.003 0.052 0.968 0.108 S 1
Wolf-PSORT
chr5.LjT43D06.200.nd	chlo 4, vacu 3, plas 2, extr 2, golg 2, chlo_mito 2, golg_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr5.LjT43D06.200.nd Not targeted -25.577 -5.637 -3.293 21.77% -16.646