Miyakogusa Predicted Gene

chr5.CM0911.360.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0911
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5APT2_VITVI 546 33.6 48.2 (tr|A5APT2) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040457 PE=4 SV=1
TAIR_pep AT1G27430.1 375 35.6 50.4 | Symbols: | GYF domain-containing protein | chr1:9521032-9526915 REVERSE
Soybean Glyma16g05800.1 600 68.2 75.4  
Lotus Consensus KMC000032A_C01 416 97.5 97.5 KMC000032A_c01
3' Unigene BP063108 1009 99.8 99.8 GENLf014g11
5' Unigene AV409313 452 100.0 100.0 MWL055e11_r
A list of protein families, domains and functional sites (searches in InterPro)
chr5.CM0911.360.nd length: 1598 aa.
IPR003169 GYF
method AccNumber shortName E-value location
HMMPfam PF02213 GYF 2.6e-10 548-603
HMMSmart SM00444 no description 6e-08 548-603
ProfileScan PS50829 GYF 12.366 547-598
no_ID  
HMMPanther PTHR14445 GRB10 6.7e-05 552-584
HMMPanther PTHR14445:SF5 gb 6.7e-05 552-584
Seg seg seg NA 44-55
112-120
126-138
900-953
1035-1057
1330-1345
1419-1432
1486-1497
1567-1582
superfamily SSF55277 GYF 1e-09 547-595
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr5.CM0911.360.nd 1598 0.110 0.118 0.082 0.889 _ 2
Wolf-PSORT
chr5.CM0911.360.nd	nucl 10, chlo 1, cyto 1, vacu 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr5.CM0911.360.nd Not targeted -52.954 -0.018 -3.803 79.45% -49.134