Miyakogusa Predicted Gene

chr5.CM0357.770.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0357
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL Q2Q4X9_MEDTR 345 70.2 76.1 (tr|Q2Q4X9) Seed maturation protein OS=Medicago truncatula GN=PM25 PE=2 SV=1
TAIR_pep AT3G22490.1 256 55.9 63.6 | Symbols: | late embryogenesis abundant protein, putative / LEA protein, putative | chr3:7969792-7970745 REVERSE
Medicago IMGA|AC135317_16.4 210 51.7 62.3 Seed maturation protein chr01_pseudomolecule_IMGAG_V2 16656533-16650754 E EGN_Mt071002 20080227
Soybean Glyma20g28550.1 333 69.8 75.3  
3' Unigene BP081774 56.0 94.4 94.4 MR075e01_f
A list of protein families, domains and functional sites (searches in InterPro)
chr5.CM0357.770.nc length: 258 aa.
IPR007011 Seed maturation protein
method AccNumber shortName E-value location
HMMPfam PF04927 SMP 1.2e-17 15-73
131-192
196-258
no_ID  
Seg seg seg NA 78-93
177-188
235-250
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr5.CM0357.770.nc 258 0.091 0.318 0.021 0.833 _ 3
Wolf-PSORT
chr5.CM0357.770.nc	cyto 7, chlo 5, nucl 1.5, cysk_nucl 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr5.CM0357.770.nc Not targeted -26.441 0 -2.693 23.37% -23.749