database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | Q2Q4X9_MEDTR | 345 | 70.2 | 76.1 | (tr|Q2Q4X9) Seed maturation protein OS=Medicago truncatula GN=PM25 PE=2 SV=1 |
TAIR_pep | AT3G22490.1 | 256 | 55.9 | 63.6 | | Symbols: | late embryogenesis abundant protein, putative / LEA protein, putative | chr3:7969792-7970745 REVERSE |
Medicago | IMGA|AC135317_16.4 | 210 | 51.7 | 62.3 | Seed maturation protein chr01_pseudomolecule_IMGAG_V2 16656533-16650754 E EGN_Mt071002 20080227 |
Soybean | Glyma20g28550.1 | 333 | 69.8 | 75.3 | |
3' Unigene | BP081774 | 56.0 | 94.4 | 94.4 | MR075e01_f |
chr5.CM0357.770.nc | length: 258 aa. | |||
IPR007011 | Seed maturation protein | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
HMMPfam | PF04927 | SMP | 1.2e-17 | 15-73 131-192 196-258 |
no_ID | ||||
Seg | seg | seg | NA | 78-93 177-188 235-250 |
Name | Length | cTP | mTP | SP | other | Loc. | RC |
---|---|---|---|---|---|---|---|
chr5.CM0357.770.nc | 258 | 0.091 | 0.318 | 0.021 | 0.833 | _ | 3 |
chr5.CM0357.770.nc cyto 7, chlo 5, nucl 1.5, cysk_nucl 1.5
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
chr5.CM0357.770.nc | Not targeted | -26.441 | 0 | -2.693 | 23.37% | -23.749 |