Miyakogusa Predicted Gene

chr5.CM0345.240.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0345
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7P5X1_VITVI 601 51.4 62.2 (tr|A7P5X1) Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032693001 PE=4 SV=1
TAIR_pep AT4G31880.1 484 43.4 60.2 | Symbols: | binding | chr4:15419441-15423945 REVERSE
Medicago IMGA|AC160629_11.5 776 54.4 64.4 Tudor , related chr01_pseudomolecule_IMGAG_V2 4185113-4194805 E EGN_Mt071002 20080227
Soybean Glyma04g06570.1 793 55.7 67.8  
3' Unigene AV776382 176 100.0 100.0 MPD098a06_f
A list of protein families, domains and functional sites (searches in InterPro)
chr5.CM0345.240.nd length: 876 aa.
IPR002999 Tudor
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00333 no description 6e-06 608-667
no_ID  
HMMPanther PTHR12663 ANDROGEN 2.5e-78 40-253
Seg seg seg NA 180-193
442-456
708-733
804-820
835-872
superfamily SSF48371 ARM 5.2e-06 1-847
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr5.CM0345.240.nd 876 0.155 0.099 0.044 0.839 _ 2
Wolf-PSORT
chr5.CM0345.240.nd	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr5.CM0345.240.nd Not targeted -24.921 0 -1.327 20.59% -23.593