Miyakogusa Predicted Gene

chr5.CM0328.630.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0328
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5AD05_VITVI 409 60.9 66.4 (tr|A5AD05) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033523 PE=4 SV=1
TAIR_pep AT2G01190.1 403 40.8 51.7 | Symbols: | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein | chr2:115022-117295 FORWARD
Medicago IMGA|AC146569_2.4 255 46.1 59.7 Octicosapeptide/Phox/Bem1p chr06_pseudomolecule_IMGAG_V2 16351794-16349134 E EGN_Mt071002 20080227
Soybean Glyma20g25620.1 739 59.1 64.7  
Lotus Consensus KMC003820A_C01 56.0 87.5 87.5 KMC003820A_c01
3' Unigene KMC003820A_C01 56.0 87.5 87.5 KMC003820A_c01
5' Unigene AV410860 79.8 97.7 97.7 MWL079c10_r
A list of protein families, domains and functional sites (searches in InterPro)
chr5.CM0328.630.nc length: 738 aa.
IPR000270 Octicosapeptide/Phox/Bem1p
method AccNumber shortName E-value location
HMMPfam PF00564 PB1 7.3e-25 71-164
HMMSmart SM00666 no description 3.5e-29 71-164
IPR002951 Atrophin
FPrintScan PR01222 ATROPHIN 6.5e-06 455-479
663-684
no_ID  
Coil coil coiled-coil NA 517-538
Seg seg seg NA 3-27
227-239
266-276
291-304
317-325
333-346
387-410
422-435
493-538
668-684
superfamily SSF54277 CAD 0.0057 81-160
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr5.CM0328.630.nc 738 0.861 0.076 0.057 0.167 C 2
Wolf-PSORT
chr5.CM0328.630.nc	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr5.CM0328.630.nc Not targeted -57.325 0 -4.220 85.63% -53.104