Miyakogusa Predicted Gene

chr5.CM0260.300.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0260
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7Q429_VITVI 375 63.0 76.6 (tr|A7Q429) Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029515001 PE=4 SV=1
TAIR_pep AT5G13560.1 310 57.7 72.9 | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18081.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41569.1) | chr5:4361582-4366321 REVERSE
Soybean Glyma10g43840.1 509 81.8 89.6  
Lotus Consensus KMC013807A_C01 394 94.2 94.2 KMC013807A_c01
3' Unigene KMC013807A_C01 694 93.0 93.0 KMC013807A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr5.CM0260.300.nc length: 318 aa.
IPR008731 phosphotransferase system, PEP-utilising enzyme, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005351 sugar porter activity    
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0008965 phosphoenolpyruvate-protein phosphotransferase activity    
Biological Process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system    
superfamily SSF47831 Enzyme 0.0031 1-80
no_ID  
Coil coil coiled-coil NA 5-36
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr5.CM0260.300.nc 318 0.295 0.138 0.097 0.602 _ 4
Wolf-PSORT
chr5.CM0260.300.nc	nucl 5.5, cyto_nucl 4, chlo 3, plas 2.5, golg_plas 2, cyto 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr5.CM0260.300.nc Not targeted -19.340 0 -5.136 12.09% -14.204