Miyakogusa Predicted Gene

chr5.CM0148.500.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0148
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A9P9Z4_POPTR 147 67.9 76.4 (tr|A9P9Z4) Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1
TAIR_pep AT5G52240.1 130 90.9 93.9 | Symbols: ATMP1, ATMAPR5, MSBP1 | MSBP1 (MEMBRANE STEROID BINDING PROTEIN 1) | chr5:21230347-21231783 FORWARD
Medicago IMGA|AC157779_21.5 157 65.6 69.5 Cytochrome b5 chr06_pseudomolecule_IMGAG_V2 9786281-9781120 F EGN_Mt071002 20080227
Soybean Glyma20g29660.1 154 70.5 74.6  
Lotus Consensus KMC005299A_C01 630 100.0 100.0 KMC005299A_c01
3' Unigene KMC005299A_C01 1082 98.8 98.8 KMC005299A_c01
5' Unigene R_KMC000745A_C01 640 100.0 100.0 R_KMC000745A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr5.CM0148.500.nd length: 155 aa.
IPR001199 Cytochrome b5
method AccNumber shortName E-value location
Molecular Function GO:0020037 heme binding    
Molecular Function GO:0046914 transition metal ion binding    
HMMPfam PF00173 Cyt-b5 0.0016 21-106
no_ID  
Gene3D 3.10.120.10 no description 5.6e-16 40-107
HMMPanther PTHR10281 MEMBRANE 5.1e-48 41-124
HMMPanther PTHR10281:SF8 STEROID 5.1e-48 41-124
Seg seg seg NA 110-125
superfamily SSF55856 Cytochrome 0.0003 42-111
Putative transmembrane regions
  From To
TM segments
SOSUI		 12 34
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr5.CM0148.500.nd 155 0.008 0.050 0.962 0.091 S 1
Wolf-PSORT
chr5.CM0148.500.nd	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr5.CM0148.500.nd Not targeted -19.419 0 -0.619 12.19% -18.800