Miyakogusa Predicted Gene
- chr5.CM0062.40.nd
- Related links:
- Predicted Sequence Links:
- Genome Sequence: CM0062
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B3VBF0_9FABA |
254 |
89.7 |
89.7 |
(tr|B3VBF0) NHX1-like protein OS=Lotus tenuis PE=2 SV=1 |
|---|
| TAIR_pep |
AT3G05030.1 |
131 |
54.8 |
64.4 |
| Symbols: ATNHX2, NHX2 | NHX2 (sodium proton exchanger 2); sodium:hydrogen antiporter | chr3:1393462-1396790 REVERSE |
|---|
| Medicago |
IMGA|AC130801_43.4 |
145 |
55.9 |
67.1 |
Sodium/hydrogen exchanger chr07_pseudomolecule_IMGAG_V2 30707661-30711064 E EGN_Mt071002 20080227 |
|---|
| Soybean |
Glyma20g37370.1 |
192 |
70.0 |
77.9 |
|
|---|
- A list of protein families, domains and functional sites (searches in InterPro)
| chr5.CM0062.40.nd |
length: 136 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR10110 |
SODIUM/HYDROGEN |
3e-45 |
1-131 |
| HMMPanther |
PTHR10110:SF2 |
SODIUM/HYDROGEN |
3e-45 |
1-131 |
| Seg |
seg |
seg |
NA |
14-27 |
- TargetP V1.0 Prediction Results
| Name |
Length |
cTP |
mTP |
SP |
other |
Loc. |
RC |
| chr5.CM0062.40.nd |
136 |
0.090 |
0.036 |
0.518 |
0.196 |
S |
4
|
- Wolf-PSORT
chr5.CM0062.40.nd chlo 6, extr 3, vacu 2, nucl 1, mito 1, E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| chr5.CM0062.40.nd |
Not targeted |
-32.716 |
0 |
-7.261 |
36.46% |
-25.455
|