Miyakogusa Predicted Gene

chr4.LjT06B21.60.nd
Related links:
Predicted Sequence Links:
Genome Sequence: LjT06B21
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7PKT8_VITVI 308 67.2 70.7 (tr|A7PKT8) Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019313001 PE=4 SV=1
TAIR_pep AT4G12780.1 267 75.0 79.8 | Symbols: | auxilin-related | chr4:7514387-7516652 FORWARD
Medicago IMGA|AC141112_46.4 300 65.2 73.5 Heat shock protein DnaJ, N-terminal chr03_pseudomolecule_IMGAG_V2 35462454-35468822 E EGN_Mt071002 20080227
Soybean Glyma08g00450.2 308 68.3 74.3  
Lotus Consensus KMC000303A_C01 434 100.0 100.0 KMC000303A_c01
3' Unigene KMC000303A_C01 791 94.2 94.2 KMC000303A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr4.LjT06B21.60.nd length: 601 aa.
IPR001623 Heat shock protein DnaJ, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0031072 heat shock protein binding    
superfamily SSF46565 Chaperone 3.6e-15 504-600
no_ID  
Coil coil coiled-coil NA 196-262
267-381
465-501
Gene3D 1.10.287.110 no description 6.6e-33 501-598
HMMPanther PTHR23172 AUXILIN/CYCLIN 2e-88 429-601
Seg seg seg NA 63-77
112-126
160-174
206-250
251-372
387-399
418-433
459-481
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.LjT06B21.60.nd 601 0.101 0.159 0.010 0.628 _ 3
Wolf-PSORT
chr4.LjT06B21.60.nd	nucl 7, chlo 5, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.LjT06B21.60.nd Not targeted -37.583 -0.243 -9.858 47.72% -27.481