Miyakogusa Predicted Gene

chr4.CM0617.490.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0617
Proteome Analysis:
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q9ZWJ4_ALOAR 948 78.4 85.4 (tr|Q9ZWJ4) Malic enzyme OS=Aloe arborescens PE=2 SV=1
TAIR_pep AT5G25880.1 890 74.5 86.2 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-MALIC ENZYME 3); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor | chr5:9024552-9028263 FORWARD
Medicago IMGA|AC137546_19.4 1040 85.4 89.5 Malic oxidoreductase chr04_pseudomolecule_IMGAG_V2 36677918-36673256 F EGN_Mt071002 20080227
Soybean Glyma05g35800.1 1036 84.4 89.8  
Lotus Consensus KMC005451A_C01 159 80.6 80.6 KMC005451A_c01
3' Unigene KMC005451A_C01 69.9 86.1 86.1 KMC005451A_c01
5' Unigene R_KMC001666A_C01 75.8 94.0 94.0 R_KMC001666A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr4.CM0617.490.nd length: 591 aa.
IPR001891 Malic oxidoreductase
method AccNumber shortName E-value location
Molecular Function GO:0004470 malic enzyme activity    
Biological Process GO:0006108 malate metabolism    
FPrintScan PR00072 MALOXRDTASE 1.8e-86 122-146
182-211
218-240
278-296
303-319
334-350
437-453
HMMPIR PIRSF000106 Malic 1.7e-303 48-591
ScanRegExp PS00331 MALIC_ENZYMES 8e-5 303-319
IPR012301 Malic enzyme, N-terminal
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
HMMPfam PF00390 malic 2.8e-120 116-305
IPR012302 Malic enzyme, NAD-binding
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
HMMPfam PF03949 Malic_M 1.5e-130 307-560
no_ID  
Gene3D 3.40.50.720 no description 4.7e-92 307-583
HMMPanther PTHR23406 MALIC 4.1e-299 80-591
HMMPanther PTHR23406:SF2 MALIC 4.1e-299 80-591
Seg seg seg NA 23-34
309-327
546-559
superfamily SSF51735 NAD(P)-binding 1.1e-97 307-591
superfamily SSF53223 Aminoacid 1e-115 50-306
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.CM0617.490.nd 591 0.100 0.078 0.076 0.913 _ 1
Wolf-PSORT
chr4.CM0617.490.nd	chlo 4, E.R. 3, vacu 2, E.R._plas 2, cyto_E.R. 2, nucl 1.5, cysk_nucl 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.CM0617.490.nd Not targeted -33.674 -6.212 -0.358 38.63% -27.104