Miyakogusa Predicted Gene

chr4.CM0281.230.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0281
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7R6A4_VITVI 1364 55.1 64.4 (tr|A7R6A4) Chromosome undetermined scaffold_1205, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008055001 PE=4 SV=1
TAIR_pep AT5G47490.1 1085 46.0 58.3 | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47480.1); similar to hypothetical protein 24.t00016 [Brassica oleracea] (GB:ABD64938.1); similar to hypothetical protein 24.t00015 [Brassica oleracea] (GB:ABD64937.1); similar to hypothetical protein 25.t00024 [Brassica oleracea] (GB:ABD64978.1); contains domain PTHR13402 (PTHR13402) | chr5:19281902-19287714 FORWARD
Medicago IMGA|AC138087_49.4 1862 69.3 75.6 N-6 Adenine-specific DNA methylase chr08_pseudomolecule_IMGAG_V2 21825399-21833107 E EGN_Mt071002 20080227
Soybean Glyma01g41790.1 1747 64.9 72.6  
Lotus Consensus KMC002744A_C01 242 95.3 95.3 KMC002744A_c01
3' Unigene KMC002744A_C01 821 95.6 95.6 KMC002744A_c01
5' Unigene R_KMC000846A_C01 81.8 81.5 81.5 R_KMC000846A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr4.CM0281.230.nc length: 1398 aa.
IPR002052 N-6 Adenine-specific DNA methylase
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008168 methyltransferase activity    
Biological Process GO:0032259 methylation    
ScanRegExp PS00092 N6_MTASE NA 1-7
no_ID  
HMMPanther PTHR13402 RGPR-RELATED 9.5e-94 292-798
819-1172
Seg seg seg NA 46-84
567-577
642-655
795-805
1140-1159
1196-1203
1326-1340
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.CM0281.230.nc 1398 0.133 0.077 0.099 0.920 _ 2
Wolf-PSORT
chr4.CM0281.230.nc	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.CM0281.230.nc Not targeted -39.354 -0.344 -15.744 51.86% -23.265