Miyakogusa Predicted Gene

chr4.CM0229.400.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0229
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5BJ27_VITVI 502 91.5 94.5 (tr|A5BJ27) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041199 PE=4 SV=1
TAIR_pep AT2G32080.2 468 84.5 91.1 | Symbols: PUR ALPHA-1 | PUR ALPHA-1 (purin-rich alpha 1); nucleic acid binding | chr2:13649793-13651113 REVERSE
Medicago IMGA|AC146567_3.4 533 96.3 99.3 PUR-alpha/beta/gamma, DNA/RNA-binding chr04_pseudomolecule_IMGAG_V2 24121594-24125932 F EGN_Mt071002 20080227
Soybean Glyma07g35160.1 546 98.5 99.3  
Lotus Consensus KMC003130A_C02 1102 98.8 98.8 KMC003130A_c02
3' Unigene KMC000648A_C02 924 96.7 96.7 KMC000648A_c02
5' Unigene R_KMC001565A_C01 735 100.0 100.0 R_KMC001565A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr4.CM0229.400.nc length: 289 aa.
IPR006628 PUR-alpha/beta/gamma, DNA/RNA-binding
method AccNumber shortName E-value location
HMMPanther PTHR12611 PUR-TRANSCRIPTIONAL 2e-86 1-289
HMMPfam PF04845 PurA 1.4e-11 19-269
HMMSmart SM00712 no description 5.2e-26 21-82
84-151
209-270
no_ID  
Seg seg seg NA 3-18
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.CM0229.400.nc 289 0.107 0.112 0.024 0.942 _ 1
Wolf-PSORT
chr4.CM0229.400.nc	nucl 7, cysk 7, cysk_nucl 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.CM0229.400.nc Not targeted -29.815 -4.024 -2.297 30.12% -23.495