Miyakogusa Predicted Gene

chr4.CM0175.360.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0175
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7PHQ1_VITVI 1155 66.0 75.3 (tr|A7PHQ1) Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018027001 PE=4 SV=1
TAIR_pep AT5G23720.1 1028 59.8 72.6 | Symbols: PHS1 | PHS1 (PROPYZAMIDE-HYPERSENSITIVE 1); protein tyrosine/serine/threonine phosphatase | chr5:7998312-8002597 FORWARD
Medicago IMGA|AC126794_40.5 1400 77.6 83.5 Dual specificity protein phosphatase; Protein kinase-like chr04_pseudomolecule_IMGAG_V2 34823707-34816673 E EGN_Mt071002 20080227
Soybean Glyma08g01160.1 1405 77.7 83.7  
3' Unigene AV769416 81.8 82.1 82.1 MWL049g03_f
5' Unigene R_KMC001266A_C01 58.0 97.0 97.0 R_KMC001266A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr4.CM0175.360.nc length: 924 aa.
IPR000340 Dual specificity protein phosphatase
method AccNumber shortName E-value location
Biological Process GO:0006470 protein amino acid dephosphorylation    
Molecular Function GO:0008138 protein tyrosine/serine/threonine phosphatase activity    
HMMPfam PF00782 DSPc 4.3e-22 697-839
HMMSmart SM00195 no description 8.3e-25 697-839
ProfileScan PS50054 TYR_PHOSPHATASE_DUAL 32.170 697-841
IPR000387 Tyrosine specific protein phosphatase and dual specificity protein phosphatase
Molecular Function GO:0004721 phosphoprotein phosphatase activity    
Biological Process GO:0006470 protein amino acid dephosphorylation    
ProfileScan PS50056 TYR_PHOSPHATASE_2 10.871 762-818
IPR011009 Protein kinase-like
superfamily SSF56112 Protein 0.00058 157-274
no_ID  
Gene3D 3.90.190.10 no description 2.1e-39 670-848
HMMPanther PTHR10159 DUAL 3.3e-136 698-904
HMMPanther PTHR10159:SF22 VHR-RELATED 3.3e-136 698-904
Seg seg seg NA 14-27
120-146
226-236
504-516
867-876
superfamily SSF52799 (Phosphotyrosine 3.3e-30 667-850
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.CM0175.360.nc 924 0.321 0.046 0.017 0.891 _ 3
Wolf-PSORT
chr4.CM0175.360.nc	nucl 11, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.CM0175.360.nc Not targeted -65.218 0 -13.551 93.21% -51.667