Miyakogusa Predicted Gene

chr4.CM0170.10.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0170
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q7Y066_SESRO 1159 89.4 91.1 (tr|Q7Y066) Plasma membrane H+-ATPase OS=Sesbania rostrata GN=srha5 PE=2 SV=1
TAIR_pep AT5G62670.1 1115 85.3 89.0 | Symbols: AHA11 | AHA11 (ARABIDOPSIS H(+)-ATPASE 11); ATPase | chr5:25176721-25182183 FORWARD
Medicago IMGA|AC125477_5.5 942 71.9 81.1 Plasma-membrane proton-efflux P-type ATPase chr08_pseudomolecule_IMGAG_V2 31793056-31786223 E EGN_Mt071002 20080227
Soybean Glyma17g10420.1 1150 88.6 90.4  
Lotus Consensus KMC000505A_C01 165 84.4 84.4 KMC000505A_c01
3' Unigene KMC000505A_C01 123 85.0 85.0 KMC000505A_c01
5' Unigene AV424967 65.9 90.6 90.6 MWM047h11_r
A list of protein families, domains and functional sites (searches in InterPro)
chr4.CM0170.10.nd length: 638 aa.
IPR000695 H+ transporting ATPase, proton pump
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism    
Biological Process GO:0015992 proton transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00120 HATPASE 1.3e-60 130-148
245-261
273-289
304-329
449-470
IPR001757 ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Molecular Function GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism    
Cellular Component GO:0016020 membrane    
FPrintScan PR00119 CATATPASE 1.5e-36 14-28
168-179
190-200
273-292
296-308
HMMPanther PTHR11939 CATION-TRANSPORTING 1.5e-227 1-384
HMMTigr TIGR01494 ATPase_P-type: 1.3e-33 248-364
ScanRegExp PS00154 ATPASE_E1_E2 NA 16-22
IPR005834 Haloacid dehalogenase-like hydrolase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolism    
HMMPfam PF00702 Hydrolase 1.6e-20 10-296
IPR006534 Plasma-membrane proton-efflux P-type ATPase
Biological Process GO:0015992 proton transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0016887 ATPase activity    
HMMPanther PTHR11939:SF61 H(+)-TRANSPORTING 1.5e-227 1-384
HMMTigr TIGR01647 ATPase-IIIA_H: 6.4e-205 1-495
no_ID  
Coil coil coiled-coil NA 589-610
Gene3D 1.20.1110.10 no description 1.3e-56 248-538
Gene3D 3.40.1110.10 no description 1.3e-13 18-176
Seg seg seg NA 286-305
501-515
596-610
superfamily SSF56784 HAD-like 2.5e-31 50-205
superfamily SSF81660 Metal 2.9e-37 1-49
superfamily SSF81665 Calcium 2.5e-36 206-538
Putative transmembrane regions
  From To
TM segments
SOSUI		 305 327
341 363
396 418
444 464
477 499
509 531
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.CM0170.10.nd 638 0.096 0.070 0.070 0.935 _ 1
Wolf-PSORT
chr4.CM0170.10.nd	plas 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.CM0170.10.nd Not targeted -28.351 -2.605 -3.050 27.10% -22.696