| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | A7P3V0_VITVI | 2061 | 73.1 | 81.2 | (tr|A7P3V0) Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030587001 PE=4 SV=1 |
| TAIR_pep | AT1G14850.1 | 2052 | 70.2 | 80.8 | | Symbols: NUP155 | NUP155 (Nucleoporin 155) | chr1:5116916-5123254 REVERSE |
| Medicago | IMGA|AC142395_32.5 | 2593 | 86.3 | 90.6 | Nuclear pore complex protein Nup155 chr04_pseudomolecule_IMGAG_V2 38068003-38057956 E EGN_Mt071002 20080227 |
| Soybean | Glyma08g05070.1 | 2650 | 88.2 | 91.5 | |
| Lotus Consensus | KMC002733A_C01 | 983 | 100.0 | 100.0 | KMC002733A_c01 |
| 3' Unigene | KMC002733A_C01 | 795 | 98.2 | 98.2 | KMC002733A_c01 |
| chr4.CM0042.1340.nc | length: 1482 aa. | |||
| IPR004870 | Nucleoporin, non-repetitive/WGA-negative | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005487 | nucleocytoplasmic transporter activity | ||
| Cellular Component | GO:0005643 | nuclear pore | ||
| Biological Process | GO:0006913 | nucleocytoplasmic transport | ||
| Molecular Function | GO:0017056 | structural constituent of nuclear pore | ||
| HMMPanther | PTHR10350 | NUCLEAR | 0 | 29-1444 |
| HMMPfam | PF03177 | Nucleoporin | 8.3e-08 | 86-363 870-960 1099-1159 1239-1292 |
| no_ID | ||||
| HMMPanther | PTHR10350:SF1 | gb | 0 | 29-1444 |
| Seg | seg | seg | NA | 351-362 440-447 1052-1063 1121-1133 1379-1398 |
| From | To | |
|---|---|---|
| TM segments SOSUI |
139 | 161 |
| Name | Length | cTP | mTP | SP | other | Loc. | RC |
|---|---|---|---|---|---|---|---|
| chr4.CM0042.1340.nc | 1482 | 0.085 | 0.100 | 0.085 | 0.852 | _ | 2 |
chr4.CM0042.1340.nc nucl 7, E.R. 4, cysk_nucl 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| chr4.CM0042.1340.nc | Targeted | 0.761 | -0.002 | -0.784 | 0.53% | 1.548 |