Miyakogusa Predicted Gene

chr4.CM0007.1100.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0007
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7Q4N6_VITVI 654 58.2 72.2 (tr|A7Q4N6) Chromosome chr10 scaffold_50, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029765001 PE=4 SV=1
TAIR_pep AT4G20910.1 506 46.6 63.6 | Symbols: CRM2, HEN1 | HEN1 (HUA ENHANCER 1) | chr4:11186275-11190586 REVERSE
Soybean Glyma05g25670.1 873 74.2 82.7  
Lotus Consensus KMC013048A_C01 426 97.8 97.8 KMC013048A_c01
3' Unigene KMC013048A_C01 1183 99.2 99.2 KMC013048A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr4.CM0007.1100.nc length: 581 aa.
IPR013217 Methyltransferase type 12
method AccNumber shortName E-value location
HMMPfam PF08242 Methyltransf_12 0.0011 355-464
no_ID  
Gene3D 3.40.50.150 no description 1e-07 330-449
HMMPanther PTHR21404 HEN1 2.3e-46 118-581
ProfileScan PS50193 SAM_BIND 11.369 347-432
superfamily SSF53335 S-adenosyl-L-methionine-dependent 3.4e-12 336-521
superfamily SSF54534 FKBP-like 1.5e-05 196-278
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.CM0007.1100.nc 581 0.228 0.225 0.015 0.394 _ 5
Wolf-PSORT
chr4.CM0007.1100.nc	nucl 8, cyto 4, cysk_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.CM0007.1100.nc Not targeted -55.857 -17.033 -4.579 83.72% -34.246