Miyakogusa Predicted Gene

chr4.CM0006.810.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0006
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5C675_VITVI 1928 55.2 66.3 (tr|A5C675) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043718 PE=4 SV=1
TAIR_pep AT3G14270.1 1806 53.6 64.8 | Symbols: | phosphatidylinositol-4-phosphate 5-kinase family protein | chr3:4754631-4761192 FORWARD
Medicago IMGA|AC124967_43.5 310 69.6 75.2 Chaperonin Cpn60/TCP-1; Phosphatidylinositol-4-phosphate 5-kinase chr08_pseudomolecule_IMGAG_V2 30853539-30852403 H EGN_Mt071002 20080227
Soybean Glyma13g17510.1 2769 76.0 82.5  
Lotus Consensus KMC006461A_C01 765 99.7 99.7 KMC006461A_c01
3' Unigene KMC006461A_C01 1197 100.0 100.0 KMC006461A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr4.CM0006.810.nc length: 1801 aa.
IPR000306 Zinc finger, FYVE-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF01363 FYVE 3.9e-17 31-103
HMMSmart SM00064 no description 4.7e-21 28-103
ProfileScan PS50178 ZF_FYVE 12.868 36-102
IPR002423 Chaperonin Cpn60/TCP-1
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0044267 cellular protein metabolism    
HMMPanther PTHR11353 CHAPERONIN 6.5e-54 402-628
HMMPfam PF00118 Cpn60_TCP1 3.2e-07 494-619
IPR002498 Phosphatidylinositol-4-phosphate 5-kinase
Molecular Function GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity    
HMMPfam PF01504 PIP5K 4e-52 1540-1775
HMMSmart SM00330 no description 1.9e-129 1485-1776
IPR011011 Zinc finger, FYVE/PHD-type
Molecular Function GO:0008270 zinc ion binding    
superfamily SSF57903 FYVE/PHD 8.2e-24 5-123
no_ID  
Coil coil coiled-coil NA 1092-1117
Gene3D 3.30.40.10 no description 7.6e-18 29-107
Gene3D 3.30.800.10 no description 3e-22 1512-1632
Gene3D 3.30.810.10 no description 1.2e-38 1632-1776
Gene3D 3.50.7.10 no description 1.8e-42 444-625
HMMPanther PTHR11353:SF14 FYVE 6.5e-54 402-628
Seg seg seg NA 112-142
203-216
314-336
1475-1485
1632-1645
superfamily SSF54849 GroEL-intermediate 9.9e-06 381-645
superfamily SSF56104 SAICAR 1.2e-88 1460-1776
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.CM0006.810.nc 1801 0.139 0.106 0.050 0.816 _ 2
Wolf-PSORT
chr4.CM0006.810.nc	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.CM0006.810.nc Not targeted -48.562 0 -13.424 71.77% -35.138