Miyakogusa Predicted Gene

chr4.CM0004.310.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0004
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5C465_VITVI 344 53.1 61.8 (tr|A5C465) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013303 PE=4 SV=1
TAIR_pep AT2G19810.1 294 50.0 61.2 | Symbols: | zinc finger (CCCH-type) family protein | chr2:8557501-8558580 FORWARD
Medicago IMGA|AC144766_8.4 416 62.5 69.2 Zinc finger, CCCH-type chr04_pseudomolecule_IMGAG_V2 36395801-36394211 F EGN_Mt071002 20080227
Soybean Glyma08g03540.1 400 62.6 67.5  
3' Unigene BP083651 571 98.5 98.5 MR100d10_f
5' Unigene AV428287 551 100.0 100.0 MWM094f08_r
A list of protein families, domains and functional sites (searches in InterPro)
chr4.CM0004.310.nd length: 347 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00642 zf-CCCH 0.00021 111-136
HMMSmart SM00356 no description 14 110-136
145-168
no_ID  
ProfileScan PS50103 ZF_CCCH 9.338 110-138
Seg seg seg NA 190-211
303-313
superfamily SSF56436 C-type 0.00018 67-166
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr4.CM0004.310.nd 347 0.132 0.213 0.115 0.713 _ 3
Wolf-PSORT
chr4.CM0004.310.nd	nucl 11, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr4.CM0004.310.nd Not targeted -38.247 0 -6.751 49.27% -31.496