Miyakogusa Predicted Gene

chr3.LjT23O13.80.nd
Related links:
Predicted Sequence Links:
Genome Sequence: LjT23O13
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q7XYX9_MEDTR 567 79.3 84.8 (tr|Q7XYX9) SNF4b OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT1G15330.1 396 56.5 71.9 | Symbols: | CBS domain-containing protein | chr1:5274363-5275494 FORWARD
Medicago IMGA|AC159141_4.4 536 76.8 81.8 CBS chr02_pseudomolecule_IMGAG_V2 24512312-24514545 E EGN_Mt071002 20080227
Soybean Glyma15g01000.1 550 77.3 82.7  
5' Unigene AV413692 89.7 98.0 98.0 MWM235c07_r
A list of protein families, domains and functional sites (searches in InterPro)
chr3.LjT23O13.80.nd length: 364 aa.
IPR000644 Cystathionine-beta-synthase
method AccNumber shortName E-value location
HMMPfam PF00571 CBS 8e-13 198-352
HMMSmart SM00116 no description 6.9e-07 203-266
304-352
no_ID  
HMMPanther PTHR13780 AMP-ACTIVATED 2.6e-65 1-231
247-357
ProfileScan PS50147 SNF4_REP 12.799 304-351
Seg seg seg NA 33-42
82-100
superfamily SSF54631 CBS-domain 4.6e-11 300-361
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.LjT23O13.80.nd 364 0.018 0.263 0.187 0.710 _ 3
Wolf-PSORT
chr3.LjT23O13.80.nd	cyto 10, chlo 1, nucl 1, mito 1, cysk 1, chlo_mito 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.LjT23O13.80.nd Not targeted -68.999 -0.120 -14.376 95.48% -54.503