Miyakogusa Predicted Gene

chr3.LjT02L14.60.nd
Related links:
Predicted Sequence Links:
Genome Sequence: LjT02L14
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7P6N0_VITVI 711 78.4 84.2 (tr|A7P6N0) Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034133001 PE=4 SV=1
TAIR_pep AT1G72710.1 661 75.7 82.0 | Symbols: CKL2 | CKL2; casein kinase I/ kinase | chr1:27376215-27379840 FORWARD
Medicago IMGA|AC136955_8.5 756 83.7 86.9 Protein kinase chr02_pseudomolecule_IMGAG_V2 22967066-22972460 E EGN_Mt071002 20080227
Soybean Glyma15g03000.1 750 84.6 87.9  
Lotus Consensus KMC016598A_C01 422 98.3 98.3 KMC016598A_c01
3' Unigene KMC016598A_C01 860 97.9 97.9 KMC016598A_c01
5' Unigene AV413096 258 100.0 100.0 MWM227h06_r
A list of protein families, domains and functional sites (searches in InterPro)
chr3.LjT02L14.60.nd length: 451 aa.
IPR000719 Protein kinase
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein amino acid phosphorylation    
BlastProDom PD000001 Q9CAI5_ARATH_Q9CAI5; 3e-112 9-219
HMMPfam PF00069 Pkinase 1.2e-43 9-247
ProfileScan PS50011 PROTEIN_KINASE_DOM 29.361 9-278
ScanRegExp PS00107 PROTEIN_KINASE_ATP 8e-5 15-38
IPR002290 Serine/threonine protein kinase
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein amino acid phosphorylation    
HMMSmart SM00220 no description 4.4e-12 9-287
IPR008271 Serine/threonine protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein amino acid phosphorylation    
ScanRegExp PS00108 PROTEIN_KINASE_ST 8e-5 124-136
IPR011009 Protein kinase-like
superfamily SSF56112 Protein 5.7e-63 1-299
no_ID  
Gene3D 1.10.510.10 no description 4.9e-55 85-293
Gene3D 3.30.200.20 no description 9.6e-32 2-84
HMMPanther PTHR11909 CASEIN 3.6e-216 19-299
HMMPanther PTHR11909:SF18 CASEIN 3.6e-216 19-299
Seg seg seg NA 221-232
301-317
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.LjT02L14.60.nd 451 0.056 0.392 0.038 0.642 _ 4
Wolf-PSORT
chr3.LjT02L14.60.nd	nucl 5, cyto 3, cysk_nucl 3, chlo 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.LjT02L14.60.nd Not targeted -28.658 0 -6.948 27.72% -21.710