Miyakogusa Predicted Gene

chr3.CM0724.170.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0724
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7P6K8_VITVI 234 45.5 56.8 (tr|A7P6K8) Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034109001 PE=4 SV=1
TAIR_pep AT3G13990.1 171 40.2 51.2 | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45644.1); contains InterPro domain Protein of unknown function DUF1296 (InterPro:IPR009719) | chr3:4625715-4630390 REVERSE
Medicago IMGA|CR932961_12.4 107 66.2 76.2 Protein of unknown function DUF1296 chr05_pseudomolecule_IMGAG_V2 23338265-23348727 E EGN_Mt071002 20080227
Soybean Glyma07g04100.1 436 66.9 76.0  
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0724.170.nd length: 361 aa.
IPR009719 Protein of unknown function DUF1296
method AccNumber shortName E-value location
HMMPfam PF06972 DUF1296 1.3e-37 16-75
no_ID  
HMMPanther PTHR10285 URIDINE 1.1e-14 10-75
HMMPanther PTHR10285:SF2 UNCHARACTERIZED 1.1e-14 10-75
Seg seg seg NA 328-334
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0724.170.nd 361 0.118 0.276 0.033 0.769 _ 3
Wolf-PSORT
chr3.CM0724.170.nd	nucl 12, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0724.170.nd Not targeted -25.586 -0.058 -5.046 21.78% -20.482