Miyakogusa Predicted Gene

chr3.CM0590.610.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0590
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7P1F7_VITVI 217 43.4 55.7 (tr|A7P1F7) Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027599001 PE=4 SV=1
TAIR_pep AT1G61260.1 181 36.0 49.1 | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11220.1); similar to unknown [Populus trichocarpa] (GB:ABK92540.1); contains InterPro domain Protein of unknown function DUF761, plant (InterPro:IPR008480) | chr1:22597421-22598651 REVERSE
Medicago IMGA|AC126013_25.4 229 47.7 55.1 Protein of unknown function DUF761, plant chr02_pseudomolecule_IMGAG_V2 18229046-18230196 H EGN_Mt071002 20080227
Soybean Glyma13g35750.1 351 56.9 67.4  
Lotus Consensus KMC011300A_C01 676 99.4 99.4 KMC011300A_c01
3' Unigene KMC011300A_C01 1308 96.9 96.9 KMC011300A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0590.610.nd length: 347 aa.
IPR008480 Protein of unknown function DUF761, plant
method AccNumber shortName E-value location
HMMPfam PF05553 DUF761 7.1e-77 7-342
no_ID  
Seg seg seg NA 136-150
158-171
287-302
Putative transmembrane regions
  From To
TM segments
SOSUI		 7 29
45 67
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0590.610.nd 347 0.015 0.040 0.870 0.115 S 2
Wolf-PSORT
chr3.CM0590.610.nd	chlo 5, vacu 3, cyto 2, E.R. 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0590.610.nd Twilight zone -7.617 -1.792 -0.827 2.57% -4.998