Miyakogusa Predicted Gene
- chr3.CM0452.200.nd
- Related links:
- Predicted Sequence Links:
- Genome Sequence: CM0452
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
A7PFK7_VITVI |
479 |
51.1 |
64.0 |
(tr|A7PFK7) Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017137001 PE=4 SV=1 |
TAIR_pep |
AT2G24100.1 |
360 |
46.5 |
58.6 |
| Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66612.1) | chr2:10252001-10253795 FORWARD |
Medicago |
IMGA|AC126784_9.5 |
387 |
47.7 |
59.5 |
hypothetical protein chr08_pseudomolecule_IMGAG_V2 33492500-33496372 E EGN_Mt071002 20080227 |
Soybean |
Glyma07g02420.1 |
664 |
72.5 |
79.6 |
|
3' Unigene |
AV764911 |
581 |
97.8 |
97.8 |
MWM019e07_f |
5' Unigene |
AV422889 |
349 |
100.0 |
100.0 |
MWM019e07_r |
- A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0452.200.nd |
length: 527 aa. |
no_ID |
|
method |
AccNumber |
shortName |
E-value |
location |
Seg |
seg |
seg |
NA |
91-113
295-306 |
- TargetP V1.0 Prediction Results
Name |
Length |
cTP |
mTP |
SP |
other |
Loc. |
RC |
chr3.CM0452.200.nd |
527 |
0.090 |
0.059 |
0.096 |
0.945 |
_ |
1
|
- Wolf-PSORT
chr3.CM0452.200.nd nucl 11, cyto 1, mito 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
chr3.CM0452.200.nd |
Not targeted |
-43.993 |
-0.543 |
-3.953 |
62.38% |
-39.496
|