Miyakogusa Predicted Gene

chr3.CM0292.380.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0292
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL A5B5J0_VITVI 803 66.5 77.3 (tr|A5B5J0) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032053 PE=4 SV=1
TAIR_pep AT3G13060.2 638 61.1 75.7 | Symbols: ECT5 | ECT5 | chr3:4180632-4183639 FORWARD
Medicago IMGA|AC144538_49.4 974 83.7 90.4 YT521-B-like protein chr04_pseudomolecule_IMGAG_V2 1178306-1193216 E EGN_Mt071002 20080227
Soybean Glyma08g24210.2 998 85.7 91.4  
Lotus Consensus KMC000551A_C01 44.1 100.0 100.0 KMC000551A_c01
3' Unigene BP078193 864 99.3 99.3 MR028h05_f
5' Unigene AV412624 89.7 87.2 87.2 MWM221h12_r
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0292.380.nc length: 576 aa.
IPR007275 YT521-B-like protein
method AccNumber shortName E-value location
HMMPanther PTHR12357 YTH 6.6e-107 341-494
HMMPfam PF04146 YTH 1.1e-60 376-466
ProfileScan PS50882 YTH 51.882 326-463
no_ID  
HMMPanther PTHR12357:SF6 YTH 6.6e-107 341-494
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0292.380.nc 576 0.107 0.086 0.064 0.958 _ 1
Wolf-PSORT
chr3.CM0292.380.nc	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0292.380.nc Not targeted -39.036 -1.131 -5.157 51.12% -32.748