Miyakogusa Predicted Gene

chr3.CM0282.590.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0282
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7P1V8_VITVI 781 82.0 89.9 (tr|A7P1V8) Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027770001 PE=4 SV=1
TAIR_pep AT5G54080.2 752 81.8 89.0 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE); homogentisate 1,2-dioxygenase | chr5:21963146-21965296 FORWARD
Soybean Glyma12g20220.1 862 91.1 95.1  
Lotus Consensus KMC002949A_C01 813 100.0 100.0 KMC002949A_c01
3' Unigene KMC002949A_C01 743 98.0 98.0 KMC002949A_c01
5' Unigene R_KMC002485A_C01 61.9 100.0 100.0 R_KMC002485A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0282.590.nc length: 463 aa.
IPR005708 Homogentisate 1,2-dioxygenase
method AccNumber shortName E-value location
Molecular Function GO:0004411 homogentisate 1,2-dioxygenase activity    
Biological Process GO:0006559 L-phenylalanine catabolism    
Biological Process GO:0006570 tyrosine metabolism    
HMMPanther PTHR11056 HOMOGENTISATE 1.4e-240 8-450
HMMPfam PF04209 HgmA 3.7e-289 9-439
HMMTigr TIGR01015 hmgA: 9.5e-204 9-439
IPR011051 Cupin, RmlC-type
superfamily SSF51182 RmlC-like 3.2e-137 8-440
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0282.590.nc 463 0.051 0.098 0.018 0.918 _ 1
Wolf-PSORT
chr3.CM0282.590.nc	nucl 8, cyto 3, chlo 1, vacu 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0282.590.nc Not targeted -40.718 0 -9.509 55.02% -31.209