Miyakogusa Predicted Gene

chr3.CM0282.1080.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0282
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7P1Q2_VITVI 786 75.7 87.0 (tr|A7P1Q2) Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027709001 PE=4 SV=1
TAIR_pep AT5G53850.2 716 71.1 83.6 | Symbols: | haloacid dehalogenase-like hydrolase family protein | chr5:21878381-21882043 REVERSE
Soybean Glyma06g36620.1 874 85.4 90.4  
Lotus Consensus KMC003316A_C01 553 99.6 99.6 KMC003316A_c01
3' Unigene KMC003316A_C01 234 99.2 99.2 KMC003316A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0282.1080.nc length: 572 aa.
IPR001303 Class II aldolase/adducin, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0046872 metal ion binding    
HMMPfam PF00596 Aldolase_II 5.9e-58 29-251
superfamily SSF53639 AraD-like 6.6e-44 19-238
IPR005834 Haloacid dehalogenase-like hydrolase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolism    
HMMPfam PF00702 Hydrolase 3.8e-10 278-492
IPR010041 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
HMMTigr TIGR01691 enolase-ppase: 2.3e-65 279-517
no_ID  
Gene3D 3.40.225.10 no description 5.1e-39 23-238
Gene3D 3.40.50.1000 no description 7.8e-07 397-499
HMMPanther PTHR10640 PENTULOSE-5-PHOSPHATE-4-EPIMERASE-RELATEDT[26-249] 7.2e-117  
HMMPanther PTHR10640:SF2 PENTULOSE-5-PHOSPHATE-4-EPIMERASE-RELATEDT[26-249] 7.2e-117  
Seg seg seg NA 97-108
superfamily SSF56784 HAD-like 2e-20 279-498
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0282.1080.nc 572 0.122 0.157 0.072 0.806 _ 2
Wolf-PSORT
chr3.CM0282.1080.nc	cysk 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0282.1080.nc Not targeted -42.627 -4.458 -7.634 59.36% -30.535