Miyakogusa Predicted Gene

chr3.CM0279.130.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0279
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5AZQ1_VITVI 553 56.3 69.6 (tr|A5AZQ1) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032620 PE=4 SV=1
TAIR_pep AT1G17210.1 472 51.0 65.0 | Symbols: | zinc ion binding | chr1:5880495-5884650 REVERSE
Medicago IMGA|AC148996_15.5 197 34.4 53.0 Zinc finger, C3HC-like chr08_pseudomolecule_IMGAG_V2 24808522-24802958 E EGN_Mt071002 20080227
Soybean Glyma15g40380.1 820 76.7 84.4  
Lotus Consensus KMC009856A_C01 141 100.0 100.0 KMC009856A_c01
3' Unigene KMC009856A_C01 979 98.3 98.3 KMC009856A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0279.130.nd length: 931 aa.
IPR012935 Zinc finger, C3HC-like
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF07967 zf-C3HC 1.1e-45 70-195
no_ID  
Seg seg seg NA 22-44
653-674
Putative transmembrane regions
  From To
TM segments
SOSUI		 574 596
637 659
724 746
764 786
801 823
844 866
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0279.130.nd 931 0.713 0.057 0.009 0.393 C 4
Wolf-PSORT
chr3.CM0279.130.nd	nucl 7, cyto 4, plas 2, cyto_pero 2