Miyakogusa Predicted Gene

chr3.CM0253.470.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0253
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5AWP1_VITVI 369 50.0 62.9 (tr|A5AWP1) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004512 PE=4 SV=1
TAIR_pep AT1G52380.1 312 43.8 61.0 | Symbols: | Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein | chr1:19513648-19514970 FORWARD
Medicago IMGA|AC147202_46.4 76.6 72.5 84.3 hypothetical protein chr07_pseudomolecule_IMGAG_V2 12279006-12279419 F EGN_Mt071002 20080227
Soybean Glyma15g01660.2 568 68.6 79.6  
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0253.470.nd length: 434 aa.
IPR000156 RanBP1
method AccNumber shortName E-value location
Biological Process GO:0046907 intracellular transport    
HMMPfam PF00638 Ran_BP1 1.3e-12 299-417
HMMSmart SM00160 no description 1.1e-18 289-414
ProfileScan PS50196 RANBD1 18.993 296-413
no_ID  
Gene3D 2.30.29.30 no description 9.1e-28 295-423
HMMPanther PTHR23138 RAN 1.3e-38 288-434
HMMPanther PTHR23138:SF4 RAN-BINDING 1.3e-38 288-434
Seg seg seg NA 233-260
superfamily SSF50729 PH 2.2e-31 284-423
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0253.470.nd 434 0.331 0.073 0.015 0.732 _ 3
Wolf-PSORT
chr3.CM0253.470.nd	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0253.470.nd Not targeted -45.768 0 -10.150 66.17% -35.618