Miyakogusa Predicted Gene

chr3.CM0246.220.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0246
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7NZE6_VITVI 1358 80.5 88.3 (tr|A7NZE6) Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024483001 PE=4 SV=1
TAIR_pep AT1G07910.1 1323 70.7 81.6 | Symbols: ATRNL, RNL | ATRNL/RNL (ARABIDOPSIS THALIANA RNA LIGASE); 2',3'-cyclic-nucleotide 3'-phosphodiesterase/ RNA ligase (ATP)/ polynucleotide kinase | chr1:2446709-2454383 FORWARD
Medicago IMGA|AC149268_11.5 630 85.9 91.1 T6D22.1 , identical chr04_pseudomolecule_IMGAG_V2 14466395-14460195 H EGN_Mt071002 20080227
Soybean Glyma11g15840.2 1417 89.9 94.0  
3' Unigene BP074540 113 98.4 98.4 GNf097c01
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0246.220.nc length: 915 aa.
IPR011060 Ribulose-phosphate binding barrel
method AccNumber shortName E-value location
superfamily SSF51366 Ribulose-phoshate 0.011 838-912
no_ID  
Seg seg seg NA 548-558
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0246.220.nc 915 0.071 0.759 0.018 0.197 M 3
Wolf-PSORT
chr3.CM0246.220.nc	nucl 4, cyto 4, cyto_nucl 4, chlo 3, cysk_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0246.220.nc Not targeted -29.710 -5.711 -1.197 29.90% -22.802