Miyakogusa Predicted Gene

chr3.CM0115.260.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0115
Proteome Analysis:
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL O24470_PEA 1375 76.0 85.4 (tr|O24470) Lipoxygenase OS=Pisum sativum GN=Lox1:Ps:1 PE=3 SV=1
TAIR_pep AT1G55020.1 979 56.9 73.3 | Symbols: LOX1 | LOX1 (Lipoxygenase 1); lipoxygenase | chr1:20529465-20533810 FORWARD
Medicago IMGA|AC140032_6.4 1370 76.5 85.1 Lipoxygenase chr08_pseudomolecule_IMGAG_V2 5597211-5591892 F EGN_Mt071002 20080227
Soybean Glyma07g00900.1 1343 74.3 84.9  
Lotus Consensus KMC019310A_C01 1929 98.7 98.7 KMC019310A_c01
3' Unigene KMC019310A_C01 1039 100.0 100.0 KMC019310A_c01
5' Unigene R_KMC000789A_C01 735 91.7 91.7 R_KMC000789A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0115.260.nc length: 843 aa.
IPR000907 Lipoxygenase
method AccNumber shortName E-value location
Molecular Function GO:0005506 iron ion binding    
Biological Process GO:0006118 electron transport    
Molecular Function GO:0016165 lipoxygenase activity    
HMMPanther PTHR11771 LIPOXYGENASE 0 1-843
IPR001024 Lipoxygenase, LH2
HMMPfam PF01477 PLAT 9.7e-31 39-142
HMMSmart SM00308 no description 1.2e-47 9-147
ProfileScan PS50095 PLAT 16.059 16-145
IPR001246 Plant lipoxygenase
Molecular Function GO:0005506 iron ion binding    
Biological Process GO:0006118 electron transport    
Molecular Function GO:0016165 lipoxygenase activity    
FPrintScan PR00468 PLTLPOXGNASE 1.1e-81 115-133
142-163
181-197
212-231
280-301
325-341
434-458
756-770
IPR013819 Lipoxygenase, C-terminal
FPrintScan PR00087 LIPOXYGENASE 1.2e-24 481-498
499-516
519-539
HMMPfam PF00305 Lipoxygenase 0 156-827
ScanRegExp PS00081 LIPOXYGENASE_2 8e-5 526-536
ScanRegExp PS00711 LIPOXYGENASE_1 8e-5 499-513
superfamily SSF48484 Lipoxigenase 3.7e-282 151-843
no_ID  
Gene3D 1.20.245.10 no description 4.5e-146 496-843
Gene3D 2.60.60.20 no description 3.1e-51 4-168
Gene3D 3.10.450.60 no description 4e-50 360-495
Gene3D 4.10.372.10 no description 1e-27 268-356
Gene3D 4.10.375.10 no description 1.5e-38 169-266
HMMPanther PTHR11771:SF2 LIPOXYGENASE 0 1-843
superfamily SSF49723 Lipase/lipooxygenase 2.3e-47 8-150
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0115.260.nc 843 0.020 0.054 0.657 0.538 S 5
Wolf-PSORT
chr3.CM0115.260.nc	cyto 12, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0115.260.nc Not targeted -25.700 -1.108 -2.489 21.99% -22.104