Miyakogusa Predicted Gene

chr3.CM0047.550.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0047
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7QQF0_VITVI 244 35.9 48.7 (tr|A7QQF0) Chromosome undetermined scaffold_142, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003328001 PE=4 SV=1
TAIR_pep AT4G26450.1 111 26.4 41.8 | Symbols: WIP1 | WIP1 (WPP-DOMAIN INTERACTING PROTEIN 1); protein heterodimerization/ protein homodimerization | chr4:13362564-13368686 FORWARD
Medicago IMGA|CT962509_1.5 606 62.5 71.1 Prefoldin chr03_pseudomolecule_IMGAG_V2 1662297-1658586 F EGN_Mt071002 20080227
Soybean Glyma06g47970.1 598 61.5 70.9  
A list of protein families, domains and functional sites (searches in InterPro)
chr3.CM0047.550.nd length: 550 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 330-351
397-432
460-481
505-533
Seg seg seg NA 161-173
228-244
333-345
456-468
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr3.CM0047.550.nd 550 0.102 0.082 0.042 0.952 _ 1
Wolf-PSORT
chr3.CM0047.550.nd	nucl 10, chlo 2, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr3.CM0047.550.nd Not targeted -48.495 -2.035 -1.860 71.64% -44.599