Miyakogusa Predicted Gene

chr2.LjT47E17.80.nc
Related links:
Predicted Sequence Links:
Genome Sequence: LjT47E17
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A3BBX5_ORYSJ 337 64.2 74.6 (tr|A3BBX5) Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_020547 PE=4 SV=1
TAIR_pep AT1G68720.1 432 35.2 48.1 | Symbols: | cytidine/deoxycytidylate deaminase family protein | chr1:25808210-25812483 FORWARD
Medicago IMGA|AC157472_42.4 81.3 40.5 52.9 CMP/dCMP deaminase, zinc-binding chr07_pseudomolecule_IMGAG_V2 22935506-22932677 E EGN_Mt071002 20080227
Soybean Glyma02g14380.1 1328 55.9 64.3  
Lotus Consensus KMC002836A_C01 874 100.0 100.0 KMC002836A_c01
3' Unigene KMC002836A_C01 729 99.5 99.5 KMC002836A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr2.LjT47E17.80.nc length: 1339 aa.
IPR002125 CMP/dCMP deaminase, zinc-binding
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016787 hydrolase activity    
HMMPfam PF00383 dCMP_cyt_deam_1 2.8e-39 1139-1238
no_ID  
Gene3D 3.40.140.10 no description 6.5e-48 1140-1316
HMMPanther PTHR11079 CYTOSINE 1.3e-63 1139-1317
HMMPanther PTHR11079:SF9 CYTIDINE/DEOXYCYTIDYLATE 1.3e-63 1139-1317
Seg seg seg NA 39-54
68-82
242-252
878-893
1009-1021
1300-1314
superfamily SSF53927 Cytidine 1.7e-43 1137-1310
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.LjT47E17.80.nc 1339 0.037 0.130 0.071 0.582 _ 3
Wolf-PSORT
chr2.LjT47E17.80.nc	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.LjT47E17.80.nc Not targeted -51.797 -4.464 -25.319 77.57% -22.013