Miyakogusa Predicted Gene

chr2.LjT41P23.50.nc
Related links:
Predicted Sequence Links:
Genome Sequence: LjT41P23
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q94KA7_PHAVU 569 71.1 76.2 (tr|Q94KA7) BZIP transcription factor 3 OS=Phaseolus vulgaris PE=2 SV=1
TAIR_pep AT2G35530.1 412 59.5 70.3 | Symbols: | bZIP transcription factor family protein | chr2:14930359-14933104 REVERSE
Medicago IMGA|CT954230_30.5 560 74.9 80.5 cAMP response element binding (CREB) protein; G-box binding, MFMR chr05_pseudomolecule_IMGAG_V2 11162478-11168785 E EGN_Mt071002 20080227
Soybean Glyma01g01740.1 595 79.0 83.6  
3' Unigene BP070178 722 98.2 98.2 GNf038g09
5' Unigene AV408948 125 100.0 100.0 MWL049d03_r
A list of protein families, domains and functional sites (searches in InterPro)
chr2.LjT41P23.50.nc length: 406 aa.
IPR004827 Basic-leucine zipper (bZIP) transcription factor
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
HMMSmart SM00338 no description 7.4e-22 302-366
ProfileScan PS50217 BZIP 13.128 304-367
ScanRegExp PS00036 BZIP_BASIC 8e-5 309-324
IPR008917 Eukaryotic transcription factor, DNA-binding
superfamily SSF47454 A 1.3e-14 259-332
IPR011616 bZIP transcription factor, bZIP_1
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF00170 bZIP_1 8.3e-24 302-366
IPR012900 G-box binding, MFMR
HMMPfam PF07777 MFMR 2.7e-109 1-195
no_ID  
Coil coil coiled-coil NA 322-371
Gene3D 1.20.5.170 no description 0.002 305-364
HMMPanther PTHR22952 CAMP-RESPONSE 1.5e-06 227-334
Seg seg seg NA 8-33
173-187
239-250
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.LjT41P23.50.nc 406 0.523 0.041 0.061 0.853 _ 4
Wolf-PSORT
chr2.LjT41P23.50.nc	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.LjT41P23.50.nc Not targeted -43.763 0 -1.383 61.88% -42.380