Miyakogusa Predicted Gene

chr2.LjT30P12.40.nc
Related links:
Predicted Sequence Links:
Genome Sequence: LjT30P12
Proteome Analysis:
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q6J1J8_ARAHY 166 50.0 59.3 (tr|Q6J1J8) Oleosin OS=Arachis hypogaea PE=2 SV=1
TAIR_pep AT3G27660.1 145 53.2 61.7 | Symbols: OLEO4 | OLEO4 (OLEOSIN4) | chr3:10245088-10246058 FORWARD
Medicago IMGA|AC174342_6.5 155 51.3 58.5 Oleosin chr06_pseudomolecule_IMGAG_V2 308113-307242 F EGN_Mt071002 20080227
Soybean Glyma19g13060.1 137 47.1 56.1  
3' Unigene KMC017961A_C01 46.1 96.3 96.3 KMC017961A_c01
A list of protein families, domains and functional sites (searches in InterPro)
chr2.LjT30P12.40.nc length: 195 aa.
IPR000136 Oleosin
method AccNumber shortName E-value location
HMMPfam PF01277 Oleosin 2.6e-63 60-177
no_ID  
Seg seg seg NA 44-49
73-93
Putative transmembrane regions
  From To
TM segments
SOSUI		 73 95
116 138
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.LjT30P12.40.nc 195 0.050 0.496 0.005 0.597 _ 5
Wolf-PSORT
chr2.LjT30P12.40.nc	plas 5.5, cyto_plas 4, chlo 2, golg 2, cyto 1.5, chlo_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.LjT30P12.40.nc Not targeted -47.191 0 -0.101 69.08% -47.089